Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.pattern-triggered immunity (PTI) network

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Hydrangea macrophylla Hma1.2p1_0271F.1 1 CH_hma_315 3 8 0.000227569
Hydrangea macrophylla Hma1.2p1_0271F.1 2 CH_hma_315 3 8 0.000227569

Available child term results

Ontology identifier Description Number of clusters
26.9.1.1 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response 4
26.9.1.1.1.1 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.flagellin receptor protein kinase component (FLS2) 24
26.9.1.1.1.2 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.co-receptor kinase component (BAK1) 41
26.9.1.1.1.3 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.dynamically associated protein kinase (BIK1) 2
26.9.1.2.1.2 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.fungal elicitor response.CERK1-LYK5 chitin receptor complex.component CERK1 45
26.9.1.2.2 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.fungal elicitor response.chitin receptor protein kinase (CEBiP) 12
26.9.1.3.1 External stimuli response.pathogen.pattern-triggered immunity (PTI) network.nematode elicitor response.receptor protein kinase (NILR) 16

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001