Functional clusters
Information
- Type MapMan
- Description External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Coffea canephora | chr1 | 1 | CH_ccan_277 | 2 | 3 | 0.00023424 |
| Rhododendron simsii | chr01 | 1 | CH_rsi_298 | 3 | 4 | 0.0000203806 |
| Coffea canephora | chr1 | 2 | CH_ccan_277 | 2 | 3 | 0.00023424 |
| Rhododendron simsii | chr01 | 2 | CH_rsi_298 | 3 | 4 | 0.0000203806 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| 26.9.1.1.1.1 | External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.flagellin receptor protein kinase component (FLS2) | 24 |
| 26.9.1.1.1.2 | External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.co-receptor kinase component (BAK1) | 41 |
| 26.9.1.1.1.3 | External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.dynamically associated protein kinase (BIK1) | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |