Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.pattern-triggered immunity (PTI) network.bacterial elicitor response.FLS2-BAK1 flagellin receptor complex.co-receptor kinase component (BAK1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 1 CH_acertr_546 2 2 0.00070497
Arabidopsis lyrata scaffold_3 1 CH_aly_405 2 2 0.000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 1 CH_arhy_624 2 2 0.000449075
Beta vulgaris Chr1_EL10_PGA_scaffold3 1 CH_bvu_80 3 3 0.0000000411285
Camellia sinensis var. sinensis Chr3 1 CH_camsi_467 3 9 0.000014827
Citrus clementina scaffold_7 1 CH_ccl_440 2 2 0.000492187
Carya illinoinensis Chr06 1 CH_cil_528 2 2 0.000619828
Chenopodium quinoa C_Quinoa_Scaffold_2775 1 CH_cqu_485 2 2 0.000473821
Davidia involucrata GWHABJS00000005 1 CH_din_493 2 2 0.000750188
Gossypium raimondii Chr12 1 CH_gra_405 2 2 0.000536107
Malus domestica Chr15 1 CH_mdo_72 5 14 0.00000000000173792
Medicago truncatula chr2 1 CH_mtr_55 5 5 1.28249e-16
Pisum sativum chr1LG6 1 CH_psa_357 2 3 0.000469451
Phaseolus vulgaris Chr02 1 CH_pvu_453 2 2 0.000734727
Quercus lobata 11 1 CH_qlo_788 2 2 0.000154887
Sechium edule LG13 1 CH_sed_91 3 3 0.000000267217
Trifolium pratense Tp57577_TGAC_v2_scaf_426 1 CH_tpr_212 2 2 0.0000756974
Tripterygium wilfordii NC_052249.1 1 CH_twi_92 4 14 0.0000000654798
Vigna mungo CM024069.1 1 CH_vmu_386 2 2 0.000646141
Vitis vinifera chr12 1 CH_vvi_227 3 9 0.00000728595
Acer truncatum chr6 2 CH_acertr_546 2 2 0.00070497
Arabidopsis lyrata scaffold_3 2 CH_aly_405 2 2 0.000660044
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.03 2 CH_arhy_624 2 2 0.000449075
Beta vulgaris Chr1_EL10_PGA_scaffold3 2 CH_bvu_80 3 3 0.0000000411285
Camellia sinensis var. sinensis Chr3 2 CH_camsi_467 3 9 0.000014827
Citrus clementina scaffold_7 2 CH_ccl_440 2 2 0.000492187
Carya illinoinensis Chr06 2 CH_cil_528 2 2 0.000619828
Chenopodium quinoa C_Quinoa_Scaffold_2775 2 CH_cqu_485 2 2 0.000473821
Davidia involucrata GWHABJS00000005 2 CH_din_493 2 2 0.000750188
Gossypium hirsutum A04 2 CH_ghi_884 2 2 0.000961256
Gossypium hirsutum D04 2 CH_ghi_885 2 2 0.000961256
Gossypium raimondii Chr12 2 CH_gra_405 2 2 0.000536107
Malus domestica Chr15 2 CH_mdo_72 5 14 0.00000000000173792
Pisum sativum chr1LG6 2 CH_psa_357 2 3 0.000469451
Phaseolus vulgaris Chr02 2 CH_pvu_453 2 2 0.000734727
Quercus lobata 11 2 CH_qlo_788 2 2 0.000154887
Sechium edule LG13 2 CH_sed_91 3 3 0.000000267217
Trifolium pratense Tp57577_TGAC_v2_scaf_426 2 CH_tpr_212 2 2 0.0000756974
Tripterygium wilfordii NC_052249.1 2 CH_twi_92 4 14 0.0000000654798
Vigna mungo CM024069.1 2 CH_vmu_386 2 2 0.000646141
Vitis vinifera chr12 2 CH_vvi_227 3 9 0.00000728595

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001