Functional clusters

Information

  • Type MapMan
  • Description External stimuli response.pathogen.pattern-triggered immunity (PTI) network.nematode elicitor response.receptor protein kinase (NILR)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC03 1 CH_bca_1058 2 3 0.000641272
Camellia sinensis var. sinensis Chr2 1 CH_camsi_619 2 3 0.000137561
Corylus avellana 4 1 CH_cav_471 2 5 0.000766607
Durio zibethinus NW_019167827.1 1 CH_dzi_356 2 2 0.000695233
Magnolia biondii Chr16 1 CH_mbi_510 2 4 0.000291382
Nelumbo nucifera chr3 1 CH_nnu_325 2 2 0.000130804
Quercus lobata 10 1 CH_qlo_761 2 3 0.000154883
Sechium edule LG12 1 CH_sed_319 2 3 0.000642039
Brassica carinata ChrC03 2 CH_bca_1058 2 3 0.000641272
Camellia sinensis var. sinensis Chr2 2 CH_camsi_619 2 3 0.000137561
Corylus avellana 4 2 CH_cav_471 2 5 0.000766607
Durio zibethinus NW_019167827.1 2 CH_dzi_356 2 2 0.000695233
Magnolia biondii Chr16 2 CH_mbi_510 2 4 0.000291382
Nelumbo nucifera chr3 2 CH_nnu_325 2 2 0.000130804
Quercus lobata 10 2 CH_qlo_761 2 3 0.000154883
Sechium edule LG12 2 CH_sed_319 2 3 0.000642039

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001