Functional clusters

Information

  • Type MapMan
  • Description Solute transport.carrier-mediated transport.DMT superfamily

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 1 CH_amhyb_71 4 4 0.00000255256
Olea europaea scaffold221 1 CH_oeu_202 4 7 0.000130212
Oryza sativa ssp. japonica chr07 1 CH_osa_96 7 24 0.0000000663468
Amaranthus hybridus AmaHy_arrow1_Scaffold_2 2 CH_amhyb_71 4 4 0.00000255256
Olea europaea scaffold221 2 CH_oeu_202 4 7 0.000130212
Oryza sativa ssp. japonica chr07 2 CH_osa_96 7 24 0.0000000663468

Available child term results

Ontology identifier Description Number of clusters
24.2.1.1 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group 4
24.2.1.1.1 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.phosphometabolite transporter (TPT/PPT/GPT/XPT) 8
24.2.1.1.11 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (UUAT) 2
24.2.1.1.3 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (URGT/UXT) 4
24.2.1.1.4 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (GONST1/2/3/4) 9
24.2.1.1.5 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (UTR1/5) 8
24.2.1.1.7 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (CSTLP) 2
24.2.1.1.8 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (UTR7) 6
24.2.1.1.9 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.nucleotide sugar transporter (ROCK) 6
24.2.1.2 Solute transport.carrier-mediated transport.DMT superfamily.nucleobase cation transporter (UPS) 97
24.2.1.3 Solute transport.carrier-mediated transport.DMT superfamily.glutathione transporter (CLT) 18
24.2.1.5 Solute transport.carrier-mediated transport.DMT superfamily.solute transporter (UmamiT) 581
24.2.1.6 Solute transport.carrier-mediated transport.DMT superfamily.organic cation transporter (PUP) 192
24.2.1.7 Solute transport.carrier-mediated transport.DMT superfamily.solute transporter (TPPT) 37

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001