Functional clusters
Information
- Type MapMan
- Description Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.phosphometabolite transporter (TPT/PPT/GPT/XPT)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 1 | CH_arhy_536 | 3 | 11 | 0.000214627 |
| Rhododendron simsii | chr06 | 1 | CH_rsi_233 | 3 | 3 | 0.00000103068 |
| Theobroma cacao | Chromosome_6 | 1 | CH_tca_191 | 3 | 3 | 0.000000675875 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_67 | 4 | 4 | 0.000000000505572 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.11 | 2 | CH_arhy_536 | 3 | 11 | 0.000214627 |
| Rhododendron simsii | chr06 | 2 | CH_rsi_233 | 3 | 3 | 0.00000103068 |
| Theobroma cacao | Chromosome_6 | 2 | CH_tca_191 | 3 | 3 | 0.000000675875 |
| Vaccinium macrocarpon | chr11_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_67 | 4 | 4 | 0.000000000505572 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |