Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase III-dependent transcription

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Brassica carinata ChrC02 1 CH_bca_737 3 4 0.000156617
Brassica carinata ChrC02 2 CH_bca_737 3 4 0.000156617

Available child term results

Ontology identifier Description Number of clusters
15.4.2 RNA biosynthesis.RNA polymerase III-dependent transcription.transcription factor (TFIIIa) 22
15.4.3.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BRF1 4
15.4.3.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIb transcription factor complex.component BDP1 14
15.4.4.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC1/Tau95 28
15.4.4.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC2/YY1 4
15.4.4.3 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.promotor-binding component TFC3 32
15.4.4.4 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC4/Tau131 30
15.4.4.5 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC7/Tau55 10
15.4.5.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.component RPC82 16
15.4.5.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.component RPC34 12
15.4.5.3 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIe transcription factor complex.component RPC31 4
15.4.6 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor heterodimer 2
15.4.6.1 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor heterodimer.small subunit 27
15.4.6.2 RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIf transcription factor heterodimer.large subunit 4
15.4.7 RNA biosynthesis.RNA polymerase III-dependent transcription.regulatory protein (MAF1) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001