Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase III-dependent transcription.transcription factor (TFIIIa)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cardamine hirsuta Chr2 1 CH_chi_262 2 2 0.0000691204
Carica papaya supercontig_66 1 CH_cpa_239 2 2 0.0000950661
Eucalyptus grandis Chr01 1 CH_egr_116 7 25 1.21656e-17
Fragaria x ananassa Fvb4-4 1 CH_fan_600 2 2 0.00066613
Glycine max Gm02 1 CH_gma_544 2 6 0.000569292
Lupinus albus Lalb_Chr04 1 CH_lal_215 2 2 0.0000524824
Malus domestica Chr15 1 CH_mdo_582 2 2 0.000227527
Petunia axillaris Peaxi162Scf00538 1 CH_pax_318 2 3 0.000422134
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_197 4 10 0.00000000279274
Trochodendron aralioides group1 1 CH_tar_277 2 2 0.0000600366
Vanilla planifolia CM028155.1 1 CH_vpl_77 3 12 0.00000180108
Cardamine hirsuta Chr2 2 CH_chi_262 2 2 0.0000691204
Carica papaya supercontig_66 2 CH_cpa_239 2 2 0.0000950661
Eucalyptus grandis Chr01 2 CH_egr_116 7 25 1.21656e-17
Fragaria x ananassa Fvb4-4 2 CH_fan_600 2 2 0.00066613
Glycine max Gm02 2 CH_gma_544 2 6 0.000569292
Lupinus albus Lalb_Chr04 2 CH_lal_215 2 2 0.0000524824
Malus domestica Chr15 2 CH_mdo_582 2 2 0.000227527
Petunia axillaris Peaxi162Scf00538 2 CH_pax_318 2 3 0.000422134
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_197 4 10 0.00000000279274
Trochodendron aralioides group1 2 CH_tar_277 2 2 0.0000600366
Vanilla planifolia CM028155.1 2 CH_vpl_77 3 12 0.00000180108

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001