Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.promotor-binding component TFC3

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 1 CH_amhyb_238 2 2 0.000505051
Aquilegia oxysepala CHR04 1 CH_aox_230 2 2 0.000240597
Arabidopsis thaliana Chr1 1 CH_ath_45 5 47 0.0000000000464797
Carica papaya supercontig_34 1 CH_cpa_281 2 3 0.000285185
Davidia involucrata GWHABJS00000007 1 CH_din_350 2 2 0.000150038
Lupinus albus Lalb_Chr10 1 CH_lal_139 3 22 0.00000635967
Magnolia biondii Chr06 1 CH_mbi_182 3 9 0.000000297156
Petunia axillaris Peaxi162Scf00006 1 CH_pax_258 2 2 0.000211067
Papaver somniferum NC_039362.1 1 CH_pso_203 3 3 0.0000000266335
Papaver somniferum NC_039359.1 1 CH_pso_634 2 2 0.000472989
Sequoiadendron giganteum chr10 1 CH_sgi_183 5 9 0.0000000000000319319
Sapria himalayana scaffold13_12996478 1 CH_shi_110 2 2 0.0000571804
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_22 5 5 5.5936e-16
Vanilla planifolia CM028154.1 1 CH_vpl_182 2 2 0.000073888
Zea mays 5 1 CH_zma_1 13 22 6.55302e-36
Zea mays 5 1 CH_zma_61 4 6 0.0000000233024
Amaranthus hybridus AmaHy_arrow1_Scaffold_1 2 CH_amhyb_238 2 2 0.000505051
Aquilegia oxysepala CHR04 2 CH_aox_230 2 2 0.000240597
Arabidopsis thaliana Chr1 2 CH_ath_45 5 47 0.0000000000464797
Carica papaya supercontig_34 2 CH_cpa_281 2 3 0.000285185
Davidia involucrata GWHABJS00000007 2 CH_din_350 2 2 0.000150038
Lupinus albus Lalb_Chr10 2 CH_lal_139 3 22 0.00000635967
Magnolia biondii Chr06 2 CH_mbi_182 3 9 0.000000297156
Petunia axillaris Peaxi162Scf00006 2 CH_pax_258 2 2 0.000211067
Papaver somniferum NC_039362.1 2 CH_pso_203 3 3 0.0000000266335
Papaver somniferum NC_039359.1 2 CH_pso_634 2 2 0.000472989
Sequoiadendron giganteum chr10 2 CH_sgi_183 5 9 0.0000000000000319319
Sapria himalayana scaffold13_12996478 2 CH_shi_110 2 2 0.0000571804
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_22 5 5 5.5936e-16
Vanilla planifolia CM028154.1 2 CH_vpl_182 2 2 0.000073888
Zea mays 5 2 CH_zma_1 13 22 6.55302e-36
Zea mays 5 2 CH_zma_61 4 6 0.0000000233024

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001