Functional clusters
Information
- Type MapMan
- Description RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC1/Tau95
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 1 | CH_amhyb_148 | 2 | 2 | 0.0000841751 |
Amborella trichopoda | AmTr_v1.0_scaffold00019 | 1 | CH_atr_194 | 2 | 2 | 0.0000794407 |
Brassica oleracea | C2 | 1 | CH_bol_395 | 2 | 3 | 0.000588319 |
Corylus avellana | 9 | 1 | CH_cav_268 | 2 | 2 | 0.0000766695 |
Coffea canephora | chr6 | 1 | CH_ccan_217 | 2 | 5 | 0.0000766598 |
Capsella rubella | scaffold_5 | 1 | CH_cru_331 | 2 | 2 | 0.000219346 |
Lupinus albus | Lalb_Chr05 | 1 | CH_lal_212 | 2 | 2 | 0.0000524824 |
Rosa chinensis | RcHm_v2.0_Chr2 | 1 | CH_rch_487 | 2 | 2 | 0.0000398653 |
Simmondsia chinensis | GWHAASQ00000013 | 1 | CH_sci_261 | 2 | 2 | 0.000510856 |
Simmondsia chinensis | GWHAASQ00000025 | 1 | CH_sci_262 | 2 | 2 | 0.000510856 |
Sapria himalayana | scaffold1_25991295 | 1 | CH_shi_163 | 2 | 3 | 0.000171536 |
Selenicereus undatus | Scaffold_33679 | 1 | CH_sun_134 | 2 | 2 | 0.0000726639 |
Trochodendron aralioides | group1 | 1 | CH_tar_364 | 2 | 2 | 0.00018011 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 1 | CH_vma_254 | 2 | 2 | 0.0000929238 |
Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 2 | CH_amhyb_148 | 2 | 2 | 0.0000841751 |
Amborella trichopoda | AmTr_v1.0_scaffold00019 | 2 | CH_atr_194 | 2 | 2 | 0.0000794407 |
Brassica oleracea | C2 | 2 | CH_bol_395 | 2 | 3 | 0.000588319 |
Corylus avellana | 9 | 2 | CH_cav_268 | 2 | 2 | 0.0000766695 |
Coffea canephora | chr6 | 2 | CH_ccan_217 | 2 | 5 | 0.0000766598 |
Capsella rubella | scaffold_5 | 2 | CH_cru_331 | 2 | 2 | 0.000219346 |
Lupinus albus | Lalb_Chr05 | 2 | CH_lal_212 | 2 | 2 | 0.0000524824 |
Rosa chinensis | RcHm_v2.0_Chr2 | 2 | CH_rch_487 | 2 | 2 | 0.0000398653 |
Simmondsia chinensis | GWHAASQ00000013 | 2 | CH_sci_261 | 2 | 2 | 0.000510856 |
Simmondsia chinensis | GWHAASQ00000025 | 2 | CH_sci_262 | 2 | 2 | 0.000510856 |
Sapria himalayana | scaffold1_25991295 | 2 | CH_shi_163 | 2 | 3 | 0.000171536 |
Selenicereus undatus | Scaffold_33679 | 2 | CH_sun_134 | 2 | 2 | 0.0000726639 |
Trochodendron aralioides | group1 | 2 | CH_tar_364 | 2 | 2 | 0.00018011 |
Vaccinium macrocarpon | chr2_Vaccinium_macrocarpon_Stevens_v1 | 2 | CH_vma_254 | 2 | 2 | 0.0000929238 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |