Functional clusters

Information

  • Type MapMan
  • Description RNA biosynthesis.RNA polymerase III-dependent transcription.TFIIIc transcription factor complex.component TFC1/Tau95

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 1 CH_amhyb_148 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00019 1 CH_atr_194 2 2 0.0000794407
Brassica oleracea C2 1 CH_bol_395 2 3 0.000588319
Corylus avellana 9 1 CH_cav_268 2 2 0.0000766695
Coffea canephora chr6 1 CH_ccan_217 2 5 0.0000766598
Capsella rubella scaffold_5 1 CH_cru_331 2 2 0.000219346
Lupinus albus Lalb_Chr05 1 CH_lal_212 2 2 0.0000524824
Rosa chinensis RcHm_v2.0_Chr2 1 CH_rch_487 2 2 0.0000398653
Simmondsia chinensis GWHAASQ00000013 1 CH_sci_261 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000025 1 CH_sci_262 2 2 0.000510856
Sapria himalayana scaffold1_25991295 1 CH_shi_163 2 3 0.000171536
Selenicereus undatus Scaffold_33679 1 CH_sun_134 2 2 0.0000726639
Trochodendron aralioides group1 1 CH_tar_364 2 2 0.00018011
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_254 2 2 0.0000929238
Amaranthus hybridus AmaHy_arrow1_Scaffold_13 2 CH_amhyb_148 2 2 0.0000841751
Amborella trichopoda AmTr_v1.0_scaffold00019 2 CH_atr_194 2 2 0.0000794407
Brassica oleracea C2 2 CH_bol_395 2 3 0.000588319
Corylus avellana 9 2 CH_cav_268 2 2 0.0000766695
Coffea canephora chr6 2 CH_ccan_217 2 5 0.0000766598
Capsella rubella scaffold_5 2 CH_cru_331 2 2 0.000219346
Lupinus albus Lalb_Chr05 2 CH_lal_212 2 2 0.0000524824
Rosa chinensis RcHm_v2.0_Chr2 2 CH_rch_487 2 2 0.0000398653
Simmondsia chinensis GWHAASQ00000013 2 CH_sci_261 2 2 0.000510856
Simmondsia chinensis GWHAASQ00000025 2 CH_sci_262 2 2 0.000510856
Sapria himalayana scaffold1_25991295 2 CH_shi_163 2 3 0.000171536
Selenicereus undatus Scaffold_33679 2 CH_sun_134 2 2 0.0000726639
Trochodendron aralioides group1 2 CH_tar_364 2 2 0.00018011
Vaccinium macrocarpon chr2_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_254 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001