Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p01330 Brassica napus
Aa31LG8G16440 Aethionema arabicum
Actinidia38457 Actinidia chinensis
Ah.09g228060 Amaranthus hybridus
AL3G48850 Arabidopsis lyrata
Aqoxy7G01159 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea
AT2G19430 Arabidopsis thaliana
ATR0789G107 Amborella trichopoda
Atru.chr7.1629 Acer truncatum
AUR62029033 Chenopodium quinoa
AUR62033933 Chenopodium quinoa
BcaB03g16729 Brassica carinata
BcaB07g31609 Brassica carinata
BcaC06g36575 Brassica carinata
BolC7t40672H Brassica oleracea
BraA07t27924Z Brassica rapa
C07p02720 Brassica napus
CANSAT56G4018 Cannabis sativa
CARHR109870 Cardamine hirsuta
Carub.0003s3371 Capsella rubella
Ca_21292_v3 Cicer arietinum L.
CBR_g13009 Chara braunii
Cc06_g11640 Coffea canephora
CDE04G2495 Ceratophyllum demersum
Ciclev10009613m.g Citrus clementina
Ciclev10009794m.g Citrus clementina
CiPaw.03G212300 Carya illinoinensis
ClCG03G015420 Citrullus lanatus
COL.COLO4_18173 Corchorus olitorius
COL.COLO4_27080 Corchorus olitorius
Cpa.g.sc28.142 Carica papaya
Cpa.g.sc28.145 Carica papaya
Cre03.g180200 Chlamydomonas reinhardtii
CsaV3_1G040620 Cucumis sativus L.
CSS0016517 Camellia sinensis var. sinensis
DCAR_010507 Daucus carota
Dinv42341 Davidia involucrata
Duzib168G0254 Durio zibethinus
ECA232G4161 Erigeron canadensis
EL10Ac8g19177 Beta vulgaris
Eucgr.C03417 Eucalyptus grandis
FAN19G1103 Fragaria x ananassa
FAN23G3127 Fragaria x ananassa
FAN26G0248 Fragaria x ananassa
FAN26G2887 Fragaria x ananassa
FAN28G0979 Fragaria x ananassa
FvH4_1g07921 Fragaria vesca
Glyma.02G198601 Glycine max
Glyma.13G106300 Glycine max
Glyma.17G053100 Glycine max
Gohir.A06G073600 Gossypium hirsutum
Gohir.D06G072500 Gossypium hirsutum
Gorai.010G084500 Gossypium raimondii
GSVIVG01015172001 Vitis vinifera
HanXRQChr10g0319491 Helianthus annuus
Haze_25940 Corylus avellana
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla
HPP92_007651 Vanilla planifolia
Hund06662 Selenicereus undatus
Lalb_Chr20g0118781 Lupinus albus
Lj4g0022709 Lotus japonicus
Lj7A540G53 Lonicera japonica
Lj7C679G14 Lonicera japonica
Lsat_1_v5_gn_5_143161 Lactuca sativa
Manes.03G036200 Manihot esculenta
Mapoly0100s0025 Marchantia polymorpha
MBI04_g12191_MAGBIO Magnolia biondii
MBI04_g35655_MAGBIO Magnolia biondii
MCO14G146 Micromonas commoda
MD02G1082800 Malus domestica
MD15G1210900 Malus domestica
Medtr4g125950 Medicago truncatula
MELO3C015492.2 Cucumis melo
Migut.L01521 Erythranthe guttata
MSTRG.10542 Avicennia marina
Nitab4.5_0001519g0100 Nicotiana tabacum
Nitab4.5_0003606g0020 Nicotiana tabacum
Nn8g38791 Nelumbo nucifera
Oeu000312.2 Olea europaea
Os09g0363600 Oryza sativa ssp. japonica
Peaxi162Scf00494g00088 Petunia axillaris
PGR004G0903 Punica granatum
Phvul.003G134700 Phaseolus vulgaris
Potri.007G001500 Populus trichocarpa
PRCOL_00004704 Prasinoderma coloniale
Prupe.7G205900 Prunus persica
Psat7g043880 Pisum sativum
PSO063G5109 Papaver somniferum
PSO782G0729 Papaver somniferum
QL02p062093 Quercus lobata
RcHm_v2.0_Chr2g0093801 Rosa chinensis
Rhsim03G0231200 Rhododendron simsii
Sabra07G0001100 Salix brachista
SalBow1G2294 Salvia bowleyana
Sc08g0008600 Simmondsia chinensis
Sed0022183 Sechium edule
SEGI_08677 Sequoiadendron giganteum
SEGI_12408 Sequoiadendron giganteum
SGA_v2.0_scaffold23G10037 Striga asiatica
Solyc07g040780.4 Solanum lycopersicum
Sopen07g019540 Solanum pennellii
Sp3g32810 Schrenkiella parvula
TAR636G2732 Trochodendron aralioides
THA.LOC104814631 Tarenaya hassleriana
Thecc.09G085200 Theobroma cacao
Thhalv10022744m.g Eutrema salsugineum
Thhalv10023917m.g Eutrema salsugineum
TPR.G9451 Trifolium pratense
TWI32G0460 Tripterygium wilfordii
unitig_578.g16412 Utricularia gibba
vmacro06303 Vaccinium macrocarpon
VMungo1215G1360 Vigna mungo
Zm00001eb310980 Zea mays

User provided reference genes

Program Settings