Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p00280 Brassica napus
AagrBONN_evm.TU.Sc2ySwM_368.1177 Anthoceros agrestis
Actinidia21050 Actinidia chinensis
Actinidia24825 Actinidia chinensis
Ah.08g213060 Amaranthus hybridus
AL4G47250 Arabidopsis lyrata
Aqoxy5G00751 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.94GFRR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BY1460 Arachis hypogaea
AT2G47680 Arabidopsis thaliana
ATR0721G069 Amborella trichopoda
ATR0796G147 Amborella trichopoda
Atru.chr5.1152 Acer truncatum
AUR62008633 Chenopodium quinoa
AUR62033138 Chenopodium quinoa
BcaB02g08754 Brassica carinata
BcaC02g12550 Brassica carinata
BcaNung06419 Brassica carinata
BolC4t21666H Brassica oleracea
BolC4t21739H Brassica oleracea
BraA05t19025Z Brassica rapa
C04p00190 Brassica napus
CAN.G1989.5 Capsicum annuum
CAN.G4124.1 Capsicum annuum
CANSAT25G0202 Cannabis sativa
CARHR143070 Cardamine hirsuta
Carub.0004s3040 Capsella rubella
Ca_10340_v3 Cicer arietinum L.
Cc01_g20800 Coffea canephora
CDE05G0518 Ceratophyllum demersum
Cfa005918 Carpinus fangiana
Ciclev10018660m.g Citrus clementina
CiPaw.07G108300 Carya illinoinensis
ClCG10G010890 Citrullus lanatus
COL.COLO4_23351 Corchorus olitorius
Cpa.g.sc9.265 Carica papaya
CsaV3_4G000770 Cucumis sativus L.
CSS0020045 Camellia sinensis var. sinensis
CSS0030253 Camellia sinensis var. sinensis
DCAR_002827 Daucus carota
Dinv19697 Davidia involucrata
Duzib138G1325 Durio zibethinus
ECA236G2215 Erigeron canadensis
EL10Ac7g17516 Beta vulgaris
Eucgr.K03477 Eucalyptus grandis
Eucgr.K03480 Eucalyptus grandis
Eucgr.K03481 Eucalyptus grandis
Eucgr.K03482 Eucalyptus grandis
Eucgr.K03483 Eucalyptus grandis
Eucgr.K03484 Eucalyptus grandis
Eucgr.K03485 Eucalyptus grandis
FAN15G1622 Fragaria x ananassa
FAN20G1487 Fragaria x ananassa
FAN24G2368 Fragaria x ananassa
FvH4_2g25691 Fragaria vesca
Gohir.A12G130600 Gossypium hirsutum
Gohir.D12G134400 Gossypium hirsutum
Gorai.008G145400 Gossypium raimondii
GSVIVG01027995001 Vitis vinifera
HanXRQChr04g0114511 Helianthus annuus
HanXRQChr06g0163801 Helianthus annuus
Haze_04932 Corylus avellana
Hma1.2p1_0589F.1_g184770 Hydrangea macrophylla
HPP92_000109 Vanilla planifolia
Hund18149 Selenicereus undatus
Hund18150 Selenicereus undatus
Lalb_Chr06g0163501 Lupinus albus
Lj1A25G7 Lonicera japonica
Lj2A1194T51 Lonicera japonica
Lj5g0009328 Lotus japonicus
Lsat_1_v5_gn_8_163500 Lactuca sativa
Manes.01G218500 Manihot esculenta
Mapoly0080s0073 Marchantia polymorpha
MD03G1287700 Malus domestica
Medtr1g088590 Medicago truncatula
MELO3C017959.2 Cucumis melo
Migut.B01151 Erythranthe guttata
Migut.D00214 Erythranthe guttata
MSTRG.18154 Avicennia marina
Nitab4.5_0002470g0060 Nicotiana tabacum
Nitab4.5_0005805g0010 Nicotiana tabacum
Nn3g21480 Nelumbo nucifera
Oeu046683.2 Olea europaea
Os01g0256800 Oryza sativa ssp. japonica
Peaxi162Scf00399g00810 Petunia axillaris
PGR044G1807 Punica granatum
PGSC0003DMG400014629 Solanum tuberosum
Potri.017G031800 Populus trichocarpa
Prupe.8G260900 Prunus persica
Psat6g166080 Pisum sativum
PSO170G4966 Papaver somniferum
PSO170G4996 Papaver somniferum
PSO407G0393 Papaver somniferum
QL12p028521 Quercus lobata
RcHm_v2.0_Chr6g0293951 Rosa chinensis
Rhsim01G0284800 Rhododendron simsii
Rhsim01G0284900 Rhododendron simsii
Sabra02G0154700 Salix brachista
Sabra17G0020300 Salix brachista
SalBow3G0505 Salvia bowleyana
Sc24g0003800 Simmondsia chinensis
Sed0019854 Sechium edule
SEGI_14043 Sequoiadendron giganteum
SEGI_25680 Sequoiadendron giganteum
SGA_v2.0_scaffold2G01396 Striga asiatica
SMO147G0086 Selaginella moellendorffii
SMO147G0281 Selaginella moellendorffii
SMO147G0285 Selaginella moellendorffii
SMO273G0010 Selaginella moellendorffii
Solyc06g009070.3 Solanum lycopersicum
Sopen06g003870 Solanum pennellii
Sp4g29610 Schrenkiella parvula
Sp4g29620 Schrenkiella parvula
TAR365G0742 Trochodendron aralioides
TAR636G2876 Trochodendron aralioides
THA.LOC104817498 Tarenaya hassleriana
Thecc.01G299800 Theobroma cacao
Thhalv10001290m.g Eutrema salsugineum
TPR.G33994 Trifolium pratense
TWI23G0215 Tripterygium wilfordii
unitig_22.g5242 Utricularia gibba
vmacro15006 Vaccinium macrocarpon
Zm00001eb333510 Zea mays

User provided reference genes

Program Settings