Gene: ATR0796G147
General Information
Structural Information
- Species Amborella trichopoda
- Gene Identifier ATR0796G147
- Transcript Identifier ATR0796G147.1
- Gene Type Coding gene
- Location AmTr_v1.0_scaffold00045 : 4910749-4955543 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D008110
- #Genes/#Species 123/89
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id evm_27.TU.AmTr_v1.0_scaffold00045.333.v1.0
- pacid 31567554
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G47680 |
| GO:0004386 | ISO | PLAZA Homology (enrichment) | helicase activity | HOM05D000113 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000571 | Zinc finger, CCCH-type |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| IPR041367 | E3 ligase, CCCH-type zinc finger |
| IPR001650 | Helicase, C-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |