Gene: PSO170G4966
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO170G4966
- Transcript Identifier PSO170G4966.01
- Gene Type Coding gene
- Location NC_039360.1 : 2207231-2213457 : positive
Gene Family Information
- ID HOM05D000113
- #Genes/#Species 2932/100
- Phylogenetic origin
- ID ORTHO05D008110
- #Genes/#Species 123/89
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid rna-XM_026597910.1
- pid XP_026453695.1
- id gene-LOC113355132
Descriptions
- product DExH-box ATP-dependent RNA helicase DExH8-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0046872 | IEA | InterPro | metal ion binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G47680 |
| GO:0004386 | ISO | PLAZA Homology (enrichment) | helicase activity | HOM05D000113 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR001650 | Helicase, C-terminal |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| IPR041367 | E3 ligase, CCCH-type zinc finger |
| IPR000571 | Zinc finger, CCCH-type |
| IPR036855 | Zinc finger, CCCH-type superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |