Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p42370 Brassica napus
Aa31LG5G15590 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.531 Anthoceros agrestis
Ah.06g189130 Amaranthus hybridus
AL3G15630 Arabidopsis lyrata
Aqoxy5G04250 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.39Z7HW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.84BFE2 Arachis hypogaea
AT3G05210 Arabidopsis thaliana
ATR0620G066 Amborella trichopoda
Atru.chr11.1544 Acer truncatum
Atru.chr2.466 Acer truncatum
Atru.chr2.472 Acer truncatum
AUR62000888 Chenopodium quinoa
AUR62005086 Chenopodium quinoa
BcaC05g30009 Brassica carinata
BcaC05g30019 Brassica carinata
BcaC05g30168 Brassica carinata
BolC5t34858H Brassica oleracea
BraA05t23013Z Brassica rapa
C05p61980 Brassica napus
CAN.G479.41 Capsicum annuum
CANSAT54G0217 Cannabis sativa
CARHR079550 Cardamine hirsuta
Carub.0003s0446 Capsella rubella
Ca_10097_v3 Cicer arietinum L.
CBR_g4857 Chara braunii
Cc02_g33730 Coffea canephora
CDE11G1040 Ceratophyllum demersum
Cfa006552 Carpinus fangiana
Cfa026476 Carpinus fangiana
Ciclev10001229m.g Citrus clementina
Ciclev10002028m.g Citrus clementina
Ciclev10003373m.g Citrus clementina
Ciclev10003460m.g Citrus clementina
Ciclev10003828m.g Citrus clementina
CiPaw.07G015100 Carya illinoinensis
ClCG08G002270 Citrullus lanatus
COL.COLO4_19840 Corchorus olitorius
Cpa.g.sc1183.2 Carica papaya
Cpa.g.sc48.16 Carica papaya
Cre03.g196651 Chlamydomonas reinhardtii
CsaV3_6G002610 Cucumis sativus L.
CSS0018445 Camellia sinensis var. sinensis
CSS0021232 Camellia sinensis var. sinensis
DCAR_029432 Daucus carota
Dinv23970 Davidia involucrata
Duzib106G1918 Durio zibethinus
ECA238G3439 Erigeron canadensis
EL10Ac4g09328 Beta vulgaris
Eucgr.H04470 Eucalyptus grandis
FAN02G0061 Fragaria x ananassa
FAN05G0068 Fragaria x ananassa
FAN05G5097 Fragaria x ananassa
FAN14G0751 Fragaria x ananassa
FAN14G5210 Fragaria x ananassa
FvH4_6g05460 Fragaria vesca
Glyma.10G156300 Glycine max
Glyma.20G232002 Glycine max
Gohir.A13G173500 Gossypium hirsutum
Gohir.D13G179200 Gossypium hirsutum
Gorai.013G204500 Gossypium raimondii
GSVIVG01000016001 Vitis vinifera
HanXRQChr15g0472081 Helianthus annuus
Haze_04230 Corylus avellana
Hma1.2p1_0666F.1_g199520 Hydrangea macrophylla
Hma1.2p1_0666F.1_g199530 Hydrangea macrophylla
HPP92_015091 Vanilla planifolia
Hund21683 Selenicereus undatus
Lalb_Chr02g0148341 Lupinus albus
Lj5g0026498 Lotus japonicus
Lj9A683T26 Lonicera japonica
Lsat_1_v5_gn_2_67520 Lactuca sativa
Manes.09G164300 Manihot esculenta
Mapoly0128s0010 Marchantia polymorpha
MBI04_g21739_MAGBIO Magnolia biondii
MBI04_g33407_MAGBIO Magnolia biondii
MBI04_g44620_MAGBIO Magnolia biondii
MCO01G606 Micromonas commoda
MD04G1208500 Malus domestica
Medtr1g082570 Medicago truncatula
MELO3C025022.2 Cucumis melo
Migut.F01514 Erythranthe guttata
MSTRG.306 Avicennia marina
Nitab4.5_0001211g0080 Nicotiana tabacum
Nitab4.5_0002756g0070 Nicotiana tabacum
Nn3g18889 Nelumbo nucifera
Os10g0518900 Oryza sativa ssp. japonica
Peaxi162Scf00274g00026 Petunia axillaris
PGR031G3204 Punica granatum
PGSC0003DMG400024658 Solanum tuberosum
Phvul.007G181700 Phaseolus vulgaris
Potri.005G036700 Populus trichocarpa
Pp3c16_18520 Physcomitrium patens
Pp3c6_29610 Physcomitrium patens
PRCOL_00003423 Prasinoderma coloniale
Prupe.6G329400 Prunus persica
Psat0ss6702g0320 Pisum sativum
PSO063G7033 Papaver somniferum
PSO782G4398 Papaver somniferum
QL03p004578 Quercus lobata
RcHm_v2.0_Chr3g0454231 Rosa chinensis
Rhsim05G0143900 Rhododendron simsii
Sabra05G0037100 Salix brachista
SalBow6G3462 Salvia bowleyana
SalBow6G6985 Salvia bowleyana
Sc16g0008400 Simmondsia chinensis
Sed0018566 Sechium edule
SGA_v2.0_scaffold34G13953 Striga asiatica
SMO146G0211 Selaginella moellendorffii
Solyc03g115580.4 Solanum lycopersicum
Sopen03g034570 Solanum pennellii
Sp3g04060 Schrenkiella parvula
TAR636G3548 Trochodendron aralioides
THA.LOC104820089 Tarenaya hassleriana
Thecc.05G307300 Theobroma cacao
Thhalv10020823m.g Eutrema salsugineum
TPR.G22794 Trifolium pratense
TPR.G7405 Trifolium pratense
TWI56G0624 Tripterygium wilfordii
unitig_746.g26625 Utricularia gibba
vmacro19639 Vaccinium macrocarpon
VMungo0720G1654 Vigna mungo
Zm00001eb043410 Zea mays

User provided reference genes

Program Settings