Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p58410 Brassica napus
Aa31LG8G11120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.454 Anthoceros agrestis
Actinidia07419 Actinidia chinensis
Actinidia32693 Actinidia chinensis
Ah.10g029140 Amaranthus hybridus
AL3G39860 Arabidopsis lyrata
Aqoxy7G01822 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.G2DL39 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.JACH1V Arachis hypogaea
AT3G24430 Arabidopsis thaliana
ATR0037G048 Amborella trichopoda
Atru.chr7.1304 Acer truncatum
AUR62011020 Chenopodium quinoa
AUR62033393 Chenopodium quinoa
BcaC06g32603 Brassica carinata
BolC7t46122H Brassica oleracea
BraA03t14902Z Brassica rapa
C07p56430 Brassica napus
CAN.G1710.9 Capsicum annuum
CANSAT56G3015 Cannabis sativa
CARHR100520 Cardamine hirsuta
Carub.0003s2473 Capsella rubella
Ca_25514_v3 Cicer arietinum L.
CBR_g30185 Chara braunii
Cc06_g09380 Coffea canephora
CDE04G2267 Ceratophyllum demersum
CDE06G2677 Ceratophyllum demersum
Cfa003287 Carpinus fangiana
Ciclev10007988m.g Citrus clementina
CiPaw.03G234800 Carya illinoinensis
ClCG06G010380 Citrullus lanatus
COL.COLO4_34883 Corchorus olitorius
Cpa.g.sc23.132 Carica papaya
Cre01.g045902 Chlamydomonas reinhardtii
CsaV3_1G030840 Cucumis sativus L.
CSS0004763 Camellia sinensis var. sinensis
CSS0005642 Camellia sinensis var. sinensis
DCAR_012086 Daucus carota
Dinv36606 Davidia involucrata
Duzib168G1885 Durio zibethinus
ECA238G4585 Erigeron canadensis
EL10Ac8g18530 Beta vulgaris
Eucgr.C03953 Eucalyptus grandis
Eucgr.C03955 Eucalyptus grandis
Eucgr.C03960 Eucalyptus grandis
Eucgr.C04130 Eucalyptus grandis
Eucgr.C04131 Eucalyptus grandis
FAN19G0453 Fragaria x ananassa
FAN26G0422 Fragaria x ananassa
FAN26G2813 Fragaria x ananassa
FvH4_1g05310 Fragaria vesca
Glyma.07G089200 Glycine max
Glyma.09G187800 Glycine max
Gohir.A05G021400 Gossypium hirsutum
Gohir.D05G022766 Gossypium hirsutum
Gohir.D05G022900 Gossypium hirsutum
Gorai.009G023100 Gossypium raimondii
GSVIVG01015424001 Vitis vinifera
HanXRQChr05g0137991 Helianthus annuus
HanXRQChr16g0530941 Helianthus annuus
Haze_25686 Corylus avellana
HPP92_006444 Vanilla planifolia
Hund09189 Selenicereus undatus
Lalb_Chr24g0397641 Lupinus albus
Lj2g0016022 Lotus japonicus
Lj7C645G9 Lonicera japonica
Lsat_1_v5_gn_8_93401 Lactuca sativa
Manes.16G070800 Manihot esculenta
Mapoly0100s0060 Marchantia polymorpha
MCO05G106 Micromonas commoda
MD02G1056300 Malus domestica
MD15G1189200 Malus domestica
Medtr6g086600 Medicago truncatula
MELO3C025316.2 Cucumis melo
Migut.K00460 Erythranthe guttata
MSTRG.10680 Avicennia marina
Nitab4.5_0001672g0130 Nicotiana tabacum
Nitab4.5_0003537g0040 Nicotiana tabacum
Nn2g11810 Nelumbo nucifera
Nn8g39257 Nelumbo nucifera
Oeu000378.3 Olea europaea
Oeu013437.1 Olea europaea
Os01g0719700 Oryza sativa ssp. japonica
Peaxi162Scf00546g00322 Petunia axillaris
PGR102G2432 Punica granatum
PGSC0003DMG400000383 Solanum tuberosum
Phvul.004G160900 Phaseolus vulgaris
Potri.018G076600 Populus trichocarpa
Pp3c19_20070 Physcomitrium patens
Pp3c8_23290 Physcomitrium patens
PRCOL_00006186 Prasinoderma coloniale
Prupe.7G227600 Prunus persica
Psat1g039560 Pisum sativum
PSO063G5751 Papaver somniferum
PSO782G1122 Papaver somniferum
QL02p085975 Quercus lobata
RcHm_v2.0_Chr1g0342131 Rosa chinensis
RcHm_v2.0_Chr2g0086481 Rosa chinensis
RcHm_v2.0_Chr2g0091011 Rosa chinensis
RcHm_v2.0_Chr2g0147101 Rosa chinensis
RcHm_v2.0_Chr3g0496131 Rosa chinensis
Rhsim01G0091800 Rhododendron simsii
Sabra18G0064600 Salix brachista
SalBow1G2443 Salvia bowleyana
Sc08g0007210 Simmondsia chinensis
Sed0012141 Sechium edule
SEGI_18085 Sequoiadendron giganteum
SGA_v2.0_scaffold109G31030 Striga asiatica
SMO118G0383 Selaginella moellendorffii
Solyc12g007010.2 Solanum lycopersicum
Sopen12g002980 Solanum pennellii
Sp3g24440 Schrenkiella parvula
SpUn0651_0010 Schrenkiella parvula
TAR624G0463 Trochodendron aralioides
TAR626G0858 Trochodendron aralioides
THA.LOC104808749 Tarenaya hassleriana
Thecc.09G114200 Theobroma cacao
Thhalv10002483m.g Eutrema salsugineum
TPR.G31450 Trifolium pratense
TWI34G1334 Tripterygium wilfordii
TWI63G1087 Tripterygium wilfordii
unitig_899.g15426 Utricularia gibba
vmacro20666 Vaccinium macrocarpon
vmacro20667 Vaccinium macrocarpon
VMungo0464G1974 Vigna mungo
Zm00001eb089070 Zea mays

User provided reference genes

Program Settings