Gene: Sopen12g002980

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g002980
  • Transcript Identifier Sopen12g002980.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 1560096-1566922 : positive

Gene Family Information

  • ID HOM05D000809
  • #Genes/#Species 730/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g002980.1

Descriptions

  • Description encodes a MRP-like protein with a nucleotide-binding domain. | HIGH-CHLOROPHYLL-FLUORESCENCE 101 (HCF101) | FUNCTIONS IN: ATP binding | INVOLVED IN: oxidation reduction | LOCATED IN: chloroplast | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Mrp, conserved site , Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal , Protein of unknown function DUF59 , ATPase-like, ParA/MinD | BEST Arabidopsis thaliana protein match is: IND1(iron-sulfur protein required for NADH dehydrogenase)-like
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016226
IEA
InterProiron-sulfur cluster assembly
GO:0040029
ISO
PLAZA Homology (enrichment)regulation of gene expression, epigenetic HOM05D000809
GO:0010048
ISO
PLAZA Homology (enrichment)vernalization response HOM05D000809

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0051536
IEA
InterProiron-sulfur cluster binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G24430
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G24430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35
IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal
IPR038492 GBBH-like, N-terminal domain superfamily
IPR034904 Fe-S cluster assembly domain superfamily
IPR044304 Iron-sulfur protein NUBPL-like
IPR002744 MIP18 family-like
Mapman id Description
1.1.4.3.1 Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (HCF101)
7.11.1.2.3 Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.scaffold protein (HCF101)