Gene: FAN26G2813
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN26G2813
- Transcript Identifier FAN26G2813.1
- Gene Type Coding gene
- Location Fvb1-2 : 1891058-1901684 : negative
Gene Family Information
- ID HOM05D000809
- #Genes/#Species 730/100
- Phylogenetic origin
- ID ORTHO05D007733
- #Genes/#Species 127/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb1-2-processed-gene-19.0.v1.0.a1
- pacid 50465292
Descriptions
- Description PF00041//PF01656//PF01883//PF06155//PF07227 - Fibronectin type III domain (fn3) // CobQ/CobB/MinD/ParA nucleotide binding domain (CbiA) // Domain of unknown function DUF59 (DUF59) // Protein of unknown function (DUF971) (DUF971) // PHD - plant homeodomain finger protein (PHD_Oberon)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010048 | IEA | InterPro | vernalization response | |
| GO:0040029 | IEA | InterPro | regulation of gene expression, epigenetic | |
| GO:0016226 | ISO | PLAZA Integrative Orthology | iron-sulfur cluster assembly | AT3G24430 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0051536 | ISO | PLAZA Integrative Orthology | iron-sulfur cluster binding | AT3G24430 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G24430 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G24430 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003961 | Fibronectin type III |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR034904 | Fe-S cluster assembly domain superfamily |
| IPR002744 | MIP18 family-like |
| IPR036116 | Fibronectin type III superfamily |
| IPR032881 | Oberon, PHD finger domain |
| IPR044514 | Vernalization insensitive 3-like |
| IPR010376 | Gamma-butyrobetaine hydroxylase-like, N-terminal |
| IPR013783 | Immunoglobulin-like fold |
| IPR038492 | GBBH-like, N-terminal domain superfamily |
| IPR033756 | Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 |
| Mapman id | Description |
|---|---|
| 1.1.4.3.1 | Photosynthesis.photophosphorylation.photosystem I.assembly and maintenance.assembly factor (HCF101) |
| 12.3.3.2.1.2.2 | Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting factor (VIN3/VEL) |
| 7.11.1.2.3 | Coenzyme metabolism.iron-sulfur cluster assembly machinery.plastidial SUF system.transfer phase.scaffold protein (HCF101) |