Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p40360 Brassica napus
A02p30970 Brassica napus
Aa31LG8G390 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.5083 Anthoceros agrestis
Actinidia30393 Actinidia chinensis
Actinidia30396 Actinidia chinensis
Ah.04g166610 Amaranthus hybridus
AL3G24930 Arabidopsis lyrata
Aqoxy4G02217 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AFR4D1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HGG2PG Arachis hypogaea
AT3G13180 Arabidopsis thaliana
ATR0751G043 Amborella trichopoda
Atru.BG.138.p Acer truncatum
Atru.chr2.2823 Acer truncatum
AUR62017112 Chenopodium quinoa
AUR62036465 Chenopodium quinoa
BcaB04g21001 Brassica carinata
BcaC02g09300 Brassica carinata
BcaC07g38372 Brassica carinata
BcaC08g45550 Brassica carinata
BolC1t05137H Brassica oleracea
BolC6t37573H Brassica oleracea
BolC6t38353H Brassica oleracea
BolC8t48798H Brassica oleracea
BraA01t04071Z Brassica rapa
BraA02t08108Z Brassica rapa
C01p51890 Brassica napus
C06p32310 Brassica napus
C08p11210 Brassica napus
CAN.G325.2 Capsicum annuum
CAN.G325.3 Capsicum annuum
CANSAT11G0717 Cannabis sativa
CARHR087770 Cardamine hirsuta
Carub.0003s1253 Capsella rubella
Ca_06399_v3 Cicer arietinum L.
Ca_29143_v3 Cicer arietinum L.
CBR_g12604 Chara braunii
Cc05_g15000 Coffea canephora
CDE02G1840 Ceratophyllum demersum
Cfa020185 Carpinus fangiana
Ciclev10010260m.g Citrus clementina
CiPaw.12G138600 Carya illinoinensis
COL.COLO4_09842 Corchorus olitorius
Cpa.g.sc12.118 Carica papaya
Cre50.g761447 Chlamydomonas reinhardtii
CSS0036592 Camellia sinensis var. sinensis
DCAR_022608 Daucus carota
Dinv10341 Davidia involucrata
Duzib268G0190 Durio zibethinus
ECA236G1337 Erigeron canadensis
EL10Ac4g07557 Beta vulgaris
Eucgr.F03687 Eucalyptus grandis
FAN11G2991 Fragaria x ananassa
FAN16G2293 Fragaria x ananassa
FAN21G0812 Fragaria x ananassa
FAN25G0452 Fragaria x ananassa
FvH4_3g42960 Fragaria vesca
FvH4_3g43140 Fragaria vesca
FvH4_3g43160 Fragaria vesca
FvH4_3g43190 Fragaria vesca
Glyma.02G301000 Glycine max
Glyma.14G013102 Glycine max
Gohir.A01G092000 Gossypium hirsutum
Gohir.D01G062200 Gossypium hirsutum
Gorai.002G100800 Gossypium raimondii
GSVIVG01014695001 Vitis vinifera
HanXRQChr15g0492631 Helianthus annuus
Haze_09831 Corylus avellana
Hma1.2p1_2829F.1_g329190 Hydrangea macrophylla
HPP92_018204 Vanilla planifolia
Hund01886 Selenicereus undatus
Lalb_Chr10g0107431 Lupinus albus
Lj8C179G13 Lonicera japonica
LjContig00081g0019548 Lotus japonicus
Lsat_1_v5_gn_7_114320 Lactuca sativa
Manes.15G059300 Manihot esculenta
Mapoly0080s0050 Marchantia polymorpha
MBI14_g25881_MAGBIO Magnolia biondii
MBI14_g40314_MAGBIO Magnolia biondii
MD03G1027000 Malus domestica
Medtr5g095140 Medicago truncatula
Medtr5g096020 Medicago truncatula
Migut.M01648 Erythranthe guttata
MSTRG.15797 Avicennia marina
Nitab4.5_0000163g0170 Nicotiana tabacum
Nitab4.5_0010137g0010 Nicotiana tabacum
Oeu049377.1 Olea europaea
Oeu049381.1 Olea europaea
Oeu049406.1 Olea europaea
Os09g0477900 Oryza sativa ssp. japonica
Peaxi162Scf00006g00319 Petunia axillaris
PGR031G2084 Punica granatum
PGSC0003DMG402029795 Solanum tuberosum
Phvul.008G279400 Phaseolus vulgaris
Potri.001G368500 Populus trichocarpa
Pp3c27_2290 Physcomitrium patens
Pp3s46_10 Physcomitrium patens
PRCOL_00005632 Prasinoderma coloniale
Prupe.6G024300 Prunus persica
Psat2g007080 Pisum sativum
PSO541G6316 Papaver somniferum
PSO675G5997 Papaver somniferum
QL08p003952 Quercus lobata
RcHm_v2.0_Chr4g0406341 Rosa chinensis
RcHm_v2.0_Chr4g0425531 Rosa chinensis
RcHm_v2.0_Chr5g0077011 Rosa chinensis
Rhsim03G0026500 Rhododendron simsii
Rhsim06G0230500 Rhododendron simsii
Sabra16G0241600 Salix brachista
SalBow8G2422 Salvia bowleyana
Sc03g0011370 Simmondsia chinensis
Sc03g0011450 Simmondsia chinensis
SEGI_00859 Sequoiadendron giganteum
SEGI_06610 Sequoiadendron giganteum
SEGI_07558 Sequoiadendron giganteum
SEGI_36284 Sequoiadendron giganteum
SGA_v2.0_scaffold168G38565 Striga asiatica
SMO133G0033 Selaginella moellendorffii
Solyc12g015710.2 Solanum lycopersicum
Sopen12g007630 Solanum pennellii
Sp3g11360 Schrenkiella parvula
TAR629G2623 Trochodendron aralioides
THA.LOC104815694 Tarenaya hassleriana
Thecc.07G012400 Theobroma cacao
Thhalv10020504m.g Eutrema salsugineum
TPR.G8601 Trifolium pratense
TWI56G0926 Tripterygium wilfordii
unitig_746.g26709 Utricularia gibba
vmacro11596 Vaccinium macrocarpon
VMungo0647G0703 Vigna mungo
Zm00001eb101440 Zea mays

User provided reference genes

Program Settings