Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p26570 Brassica napus
Aa31LG4G500 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.2431 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.2432 Anthoceros agrestis
Actinidia08810 Actinidia chinensis
Ah.01g020810 Amaranthus hybridus
AL2G41300 Arabidopsis lyrata
AL3G17940 Arabidopsis lyrata
Aqoxy7G02084 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.FYL3MV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IMA97E Arachis hypogaea
AT1G80210 Arabidopsis thaliana
AT3G06820 Arabidopsis thaliana
ATR1156G007 Amborella trichopoda
ATR1156G076 Amborella trichopoda
Atru.chr1.3093 Acer truncatum
AUR62011560 Chenopodium quinoa
AUR62016379 Chenopodium quinoa
BcaB02g07290 Brassica carinata
BcaC08g45297 Brassica carinata
BolC6t38065H Brassica oleracea
BraA07t30300Z Brassica rapa
C06p28990 Brassica napus
CAN.G395.46 Capsicum annuum
CAN.G395.47 Capsicum annuum
CANSAT56G0953 Cannabis sativa
CARHR074270 Cardamine hirsuta
CARHR177930 Cardamine hirsuta
Carub.0002s2731 Capsella rubella
Ca_01085_v3 Cicer arietinum L.
CBR_g46861 Chara braunii
Cc04_g04010 Coffea canephora
Cc04_g04020 Coffea canephora
CDE01G0292 Ceratophyllum demersum
CDE02G1452 Ceratophyllum demersum
Cfa002011 Carpinus fangiana
Ciclev10025661m.g Citrus clementina
CiPaw.01G244400 Carya illinoinensis
CiPaw.02G154800 Carya illinoinensis
ClCG07G012810 Citrullus lanatus
COL.COLO4_12895 Corchorus olitorius
COL.COLO4_12896 Corchorus olitorius
Cpa.g.sc336.8 Carica papaya
Cre11.g475400 Chlamydomonas reinhardtii
CsaV3_4G001390 Cucumis sativus L.
CSS0003126 Camellia sinensis var. sinensis
CSS0009710 Camellia sinensis var. sinensis
CSS0037293 Camellia sinensis var. sinensis
DCAR_025483 Daucus carota
Dinv30571 Davidia involucrata
Dinv38097 Davidia involucrata
Duzib235G1092 Durio zibethinus
ECA234G2940 Erigeron canadensis
EL10Ac9g21940 Beta vulgaris
Eucgr.J03045 Eucalyptus grandis
FAN02G2127 Fragaria x ananassa
FAN05G1558 Fragaria x ananassa
FAN09G0405 Fragaria x ananassa
FAN14G4362 Fragaria x ananassa
FvH4_6g30340 Fragaria vesca
Glyma.13G363400 Glycine max
Glyma.15G010400 Glycine max
Gohir.A06G112600 Gossypium hirsutum
Gohir.D06G117200 Gossypium hirsutum
Gorai.010G134800 Gossypium raimondii
GSVIVG01017250001 Vitis vinifera
GSVIVG01017251001 Vitis vinifera
HanXRQChr10g0303071 Helianthus annuus
HanXRQChr10g0303081 Helianthus annuus
Haze_16512 Corylus avellana
Haze_16513 Corylus avellana
HPP92_009843 Vanilla planifolia
Hund06580 Selenicereus undatus
Lalb_Chr14g0373671 Lupinus albus
Lalb_Chr14g0373681 Lupinus albus
Lj3g0017842 Lotus japonicus
Lj5A68T70 Lonicera japonica
Lj5C68G25 Lonicera japonica
Lsat_1_v5_gn_5_132520 Lactuca sativa
Manes.04G116500 Manihot esculenta
Mapoly0053s0043 Marchantia polymorpha
MBI01_g11875_MAGBIO Magnolia biondii
MD09G1221000 Malus domestica
MD17G1204400 Malus domestica
Medtr2g103110 Medicago truncatula
MELO3C017901.2 Cucumis melo
Migut.D01055 Erythranthe guttata
MSTRG.9436 Avicennia marina
Nitab4.5_0000620g0060 Nicotiana tabacum
Nitab4.5_0013710g0010 Nicotiana tabacum
Nn2g11952 Nelumbo nucifera
Oeu014842.2 Olea europaea
Oeu052283.1 Olea europaea
Oeu063802.2 Olea europaea
Os05g0542600 Oryza sativa ssp. japonica
Peaxi162Scf00207g00731 Petunia axillaris
PGR031G1627 Punica granatum
PGSC0003DMG401028513 Solanum tuberosum
PGSC0003DMG402028513 Solanum tuberosum
Phvul.005G174900 Phaseolus vulgaris
Potri.001G172800 Populus trichocarpa
Pp3c27_4740 Physcomitrium patens
Pp3c6_24500 Physcomitrium patens
Prupe.3G079900 Prunus persica
Psat5g300440 Pisum sativum
PSO170G3249 Papaver somniferum
QL05p027824 Quercus lobata
RcHm_v2.0_Chr2g0136621 Rosa chinensis
RcHm_v2.0_Chr2g0136631 Rosa chinensis
Rhsim12G0193000 Rhododendron simsii
Sabra01G0138900 Salix brachista
SalBow2G2365 Salvia bowleyana
SalBow8G0881 Salvia bowleyana
Sc10g0005720 Simmondsia chinensis
Sed0002477 Sechium edule
Sed0012845 Sechium edule
SEGI_35764 Sequoiadendron giganteum
SGA_v2.0_scaffold16G07615 Striga asiatica
SGA_v2.0_scaffold37G14789 Striga asiatica
SMO196G0028 Selaginella moellendorffii
SMO234G0005 Selaginella moellendorffii
Solyc06g067990.3 Solanum lycopersicum
Sopen06g025270 Solanum pennellii
Sopen06g025280 Solanum pennellii
Sp5g35600 Schrenkiella parvula
TAR383G0281 Trochodendron aralioides
THA.LOC104812497 Tarenaya hassleriana
Thecc.06G073100 Theobroma cacao
Thhalv10018648m.g Eutrema salsugineum
TPR.G37278 Trifolium pratense
TPR.G37284 Trifolium pratense
TWI18G0833 Tripterygium wilfordii
TWI75G1755 Tripterygium wilfordii
unitig_899.g14780 Utricularia gibba
vmacro16915 Vaccinium macrocarpon
VMungo1080G0636 Vigna mungo
Zm00001eb294490 Zea mays
Zm00001eb342510 Zea mays

User provided reference genes

Program Settings