Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p39040 Brassica napus
A05p34520 Brassica napus
Aa31LG8G2100 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1872 Anthoceros agrestis
Actinidia09808 Actinidia chinensis
Ah.04g164250 Amaranthus hybridus
AL3G27210 Arabidopsis lyrata
Aqoxy7G03872 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.3VV2Z3 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5E18AM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5IY6XE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NUK3H0 Arachis hypogaea
AT3G14890 Arabidopsis thaliana
ATR1131G028 Amborella trichopoda
Atru.chr2.2132 Acer truncatum
AUR62019576 Chenopodium quinoa
AUR62042780 Chenopodium quinoa
AUR62042782 Chenopodium quinoa
BcaB06g25330 Brassica carinata
BcaB06g29516 Brassica carinata
BcaNung07105 Brassica carinata
BolC3t17001H Brassica oleracea
BolC5t33915H Brassica oleracea
BraA03t13053Z Brassica rapa
BraA05t22272Z Brassica rapa
C03p47310 Brassica napus
C05p52260 Brassica napus
CAN.G375.16 Capsicum annuum
CANSAT35G1445 Cannabis sativa
CARHR089830 Cardamine hirsuta
Carub.0003s1455 Capsella rubella
Ca_26224_v3 Cicer arietinum L.
CBR_g66772 Chara braunii
Cc05_g11070 Coffea canephora
CDE09G1444 Ceratophyllum demersum
Ciclev10023741m.g Citrus clementina
CiPaw.11G160200 Carya illinoinensis
ClCG11G017440 Citrullus lanatus
COL.COLO4_17542 Corchorus olitorius
Cpa.g.sc77.9 Carica papaya
Cre09.g388726 Chlamydomonas reinhardtii
CsaV3_4G033100 Cucumis sativus L.
CSS0012296 Camellia sinensis var. sinensis
CSS0038261 Camellia sinensis var. sinensis
CSS0039124 Camellia sinensis var. sinensis
DCAR_017172 Daucus carota
Dinv18365 Davidia involucrata
Duzib213G0837 Durio zibethinus
ECA240G0297 Erigeron canadensis
ECA240G3232 Erigeron canadensis
EL10Ac4g08345 Beta vulgaris
Eucgr.F01242 Eucalyptus grandis
FAN11G3478 Fragaria x ananassa
FAN16G3394 Fragaria x ananassa
FAN21G3659 Fragaria x ananassa
FAN25G1853 Fragaria x ananassa
FvH4_3g18270 Fragaria vesca
FvH4_4g05840 Fragaria vesca
Glyma.06G229100 Glycine max
Glyma.12G157700 Glycine max
Gohir.A01G054300 Gossypium hirsutum
Gohir.D01G042722 Gossypium hirsutum
Gorai.002G054600 Gossypium raimondii
GSVIVG01014196001 Vitis vinifera
HanXRQChr12g0362951 Helianthus annuus
HanXRQChr13g0390281 Helianthus annuus
Haze_09322 Corylus avellana
Hma1.2p1_0113F.1_g055130 Hydrangea macrophylla
Hma1.2p1_0290F.1_g114850 Hydrangea macrophylla
HPP92_009836 Vanilla planifolia
Hund10554 Selenicereus undatus
Lalb_Chr03g0031161 Lupinus albus
Lalb_Chr19g0133801 Lupinus albus
Lj1C829T6 Lonicera japonica
Lj3g0009561 Lotus japonicus
Lsat_1_v5_gn_9_99860 Lactuca sativa
Manes.15G094900 Manihot esculenta
Mapoly0056s0069 Marchantia polymorpha
MBI06_g29324_MAGBIO Magnolia biondii
MCO04G542 Micromonas commoda
MD11G1263900 Malus domestica
Medtr6g052000 Medicago truncatula
Medtr6g052005 Medicago truncatula
Medtr6g464930 Medicago truncatula
Medtr6g466500 Medicago truncatula
MELO3C025641.2 Cucumis melo
Migut.M00727 Erythranthe guttata
MSTRG.12865 Avicennia marina
Nitab4.5_0003565g0060 Nicotiana tabacum
Nitab4.5_0006953g0040 Nicotiana tabacum
Nn7g37328 Nelumbo nucifera
Oeu031030.1 Olea europaea
Os01g0737300 Oryza sativa ssp. japonica
Os01g0737401 Oryza sativa ssp. japonica
Peaxi162Scf00111g01457 Petunia axillaris
PGR083G1657 Punica granatum
PGSC0003DMG400007070 Solanum tuberosum
Phvul.011G162300 Phaseolus vulgaris
Potri.001G390500 Populus trichocarpa
Pp3c6_17140 Physcomitrium patens
PRCOL_00001017 Prasinoderma coloniale
Prupe.4G164600 Prunus persica
Psat3g076840 Pisum sativum
Psat3g076920 Pisum sativum
Psat3g076960 Pisum sativum
Psat3g077040 Pisum sativum
PSO384G1010 Papaver somniferum
PSO478G1721 Papaver somniferum
PSO478G3490 Papaver somniferum
PSO782G2110 Papaver somniferum
PSO782G5034 Papaver somniferum
QL08p026221 Quercus lobata
QL08p026231 Quercus lobata
RcHm_v2.0_Chr1g0352751 Rosa chinensis
RcHm_v2.0_Chr5g0030891 Rosa chinensis
RcHm_v2.0_Chr5g0030901 Rosa chinensis
Rhsim06G0208200 Rhododendron simsii
Sabra16G0255900 Salix brachista
SalBow1G3547 Salvia bowleyana
SalBow8G1024 Salvia bowleyana
Sc16g0007590 Simmondsia chinensis
Sed0006465 Sechium edule
SEGI_01303 Sequoiadendron giganteum
SEGI_37980 Sequoiadendron giganteum
SGA_v2.0_scaffold70G23376 Striga asiatica
SHI25552 Sapria himalayana
SHI37131 Sapria himalayana
SMO137G0206 Selaginella moellendorffii
SMO175G0006 Selaginella moellendorffii
Solyc07g062430.3 Solanum lycopersicum
Sopen07g030670 Solanum pennellii
Sp3g13100 Schrenkiella parvula
TAR636G1993 Trochodendron aralioides
THA.LOC104822566 Tarenaya hassleriana
Thecc.07G116500 Theobroma cacao
Thecc.07G117100 Theobroma cacao
Thhalv10020510m.g Eutrema salsugineum
TPR.G12585 Trifolium pratense
TPR.G17654 Trifolium pratense
TWI38G0078 Tripterygium wilfordii
unitig_749.g13541 Utricularia gibba
vmacro11941 Vaccinium macrocarpon
vmacro23385 Vaccinium macrocarpon
vmacro23467 Vaccinium macrocarpon
VMungo1127G0129 Vigna mungo
Zm00001eb153930 Zea mays

User provided reference genes

Program Settings