Gene: Carub.0003s1455

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1455
  • Transcript Identifier Carub.0003s1455.1
  • Gene Type Coding gene
  • Location scaffold_3 : 5120307-5124727 : positive

Gene Family Information

  • ID HOM05D005043
  • #Genes/#Species 148/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1455.v1.1
  • pacid 39241009
  • synonym Carubv10013122m.g

Descriptions

  • Description 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT3G14890
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT3G14890

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G14890

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001510 Zinc finger, PARP-type
IPR006551 Polynucleotide 3'-phosphatase
IPR006549 HAD-superfamily hydrolase,subfamily IIIA
IPR023214 HAD superfamily
IPR036957 Zinc finger, PARP-type superfamily
IPR036412 HAD-like superfamily
IPR013954 Polynucleotide kinase 3 phosphatase
Mapman id Description
14.5.6 DNA damage response.base excision repair (BER).DNA phosphatase (ZDP)