Gene: AT3G14890

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G14890
  • Transcript Identifier AT3G14890.1
  • Gene Type Coding gene
  • Location Chr3 : 5008751-5013060 : positive

Gene Family Information

  • ID HOM05D005043
  • #Genes/#Species 148/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G14890.1
  • uniprot Q84JE8

Descriptions

  • Description phosphoesterase
  • Computational description phosphoesterase; FUNCTIONS IN: DNA binding, catalytic activity, zinc ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIIA (InterPro:IPR006549), Polynucleotide kinase 3 phosphatase, central region (InterPro:IPR013954), Zinc finger, PARP-type (InterPro:IPR001510), Polynucleotide kinase 3, phosphatase (InterPro:IPR015636), DNA 3-phosphatase (InterPro:IPR006551); BEST Arabidopsis thaliana protein match is: poly(ADP-ribose) polymerase 2 (TAIR:AT2G31320.1); Has 2061 Blast hits to 1425 proteins in 265 species: Archae - 2; Bacteria - 49; Metazoa - 943; Fungi - 202; Plants - 219; Viruses - 45; Other Eukaryotes - 601 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016310
IEA
GOA Databasephosphorylation
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006281
IGI
IBA
Gene OntologyDNA repair1 2
GO:0098506
IEA
GOA Databasepolynucleotide 3' dephosphorylation
GO:0046939
IBA
Gene Ontologynucleotide phosphorylation1
GO:0080111
IGI
Gene OntologyDNA demethylation2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
Gene Ontologyzinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0016301
IEA
GOA Databasekinase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046403
IEA
GOA Databasepolynucleotide 3'-phosphatase activity
GO:0046403
IBA
Gene Ontologypolynucleotide 3'-phosphatase activity1
GO:0046404
IBA
Gene Ontologypolydeoxyribonucleotide 5'-hydroxyl-kinase activity1
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding1
GO:0005515
IPI
Gene Ontologyprotein binding3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006551 Polynucleotide 3'-phosphatase
IPR036957 Zinc finger, PARP-type superfamily
IPR036412 HAD-like superfamily
IPR001510 Zinc finger, PARP-type
IPR013954 Polynucleotide kinase 3 phosphatase
IPR006549 HAD-superfamily hydrolase,subfamily IIIA
IPR023214 HAD superfamily
Mapman id Description
14.5.6 DNA damage response.base excision repair (BER).DNA phosphatase (ZDP)