Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p02010 Brassica napus
A07p24840 Brassica napus
A09p52090 Brassica napus
Aa31LG10G14060 Aethionema arabicum
Aa31LG1G25520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4655 Anthoceros agrestis
Actinidia11436 Actinidia chinensis
Ah.07g203020 Amaranthus hybridus
Ah.13g073310 Amaranthus hybridus
AL4G42690 Arabidopsis lyrata
AL5G41860 Arabidopsis lyrata
Aqoxy5G03981 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.H8LWLB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I91R84 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PL7ZZZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y7N0XK Arachis hypogaea
AT2G43810 Arabidopsis thaliana
AT3G59810 Arabidopsis thaliana
ATR0171G021 Amborella trichopoda
Atru.chr3.1946 Acer truncatum
AUR62002431 Chenopodium quinoa
AUR62023757 Chenopodium quinoa
BcaB02g07770 Brassica carinata
BcaB02g08208 Brassica carinata
BcaC02g10088 Brassica carinata
BcaC08g45011 Brassica carinata
BolC4t24853H Brassica oleracea
BolC6t37806H Brassica oleracea
BraA04t15926Z Brassica rapa
BraA07t30128Z Brassica rapa
BraA09t40641Z Brassica rapa
C04p32900 Brassica napus
C06p26430 Brassica napus
CAN.G960.57 Capsicum annuum
CANSAT54G1898 Cannabis sativa
CARHR170150 Cardamine hirsuta
Carub.0004s2635 Capsella rubella
Carub.0005s2653 Capsella rubella
Ca_03838_v3 Cicer arietinum L.
CBR_g23546 Chara braunii
Cc03_g15060 Coffea canephora
CDE02G4113 Ceratophyllum demersum
CDE06G1144 Ceratophyllum demersum
Cfa008488 Carpinus fangiana
Cfa027073 Carpinus fangiana
Ciclev10023071m.g Citrus clementina
CiPaw.01G199100 Carya illinoinensis
CiPaw.02G123500 Carya illinoinensis
ClCG11G000770 Citrullus lanatus
COL.COLO4_03308 Corchorus olitorius
COL.COLO4_25170 Corchorus olitorius
Cpa.g.sc601.1 Carica papaya
Cre03.g151750 Chlamydomonas reinhardtii
CsaV3_5G012480 Cucumis sativus L.
CSS0006315 Camellia sinensis var. sinensis
CSS0046632 Camellia sinensis var. sinensis
DCAR_027508 Daucus carota
Dinv18304 Davidia involucrata
Duzib151G0738 Durio zibethinus
Duzib268G1882 Durio zibethinus
ECA238G2251 Erigeron canadensis
EL10Ac3g06124 Beta vulgaris
Eucgr.D00038 Eucalyptus grandis
Eucgr.G01588 Eucalyptus grandis
Eucgr.G01590 Eucalyptus grandis
Eucgr.G01594 Eucalyptus grandis
Eucgr.G01595 Eucalyptus grandis
Eucgr.L00030 Eucalyptus grandis
Eucgr.L00039 Eucalyptus grandis
FAN23G0186 Fragaria x ananassa
FAN26G2197 Fragaria x ananassa
FAN28G1098 Fragaria x ananassa
FvH4_1g00440 Fragaria vesca
FvH4_4g16190 Fragaria vesca
Glyma.09G262700 Glycine max
Glyma.18G229600 Glycine max
Gohir.A02G007400 Gossypium hirsutum
Gohir.A09G213620 Gossypium hirsutum
Gohir.D02G007200 Gossypium hirsutum
Gohir.D09G212900 Gossypium hirsutum
Gorai.005G008600 Gossypium raimondii
Gorai.006G232700 Gossypium raimondii
GSVIVG01038197001 Vitis vinifera
HanXRQChr12g0372591 Helianthus annuus
HanXRQChr14g0449021 Helianthus annuus
Haze_11169 Corylus avellana
Haze_27419 Corylus avellana
Hma1.2p1_0108F.1_g051900 Hydrangea macrophylla
HPP92_007009 Vanilla planifolia
Lalb_Chr08g0242021 Lupinus albus
Lalb_Chr13g0291081 Lupinus albus
Lj3g0027067 Lotus japonicus
Lsat_1_v5_gn_2_85181 Lactuca sativa
Manes.05G137535 Manihot esculenta
Manes.12G001100 Manihot esculenta
Mapoly0124s0040 Marchantia polymorpha
MBI17_g44062_MAGBIO Magnolia biondii
MBI17_g46128_MAGBIO Magnolia biondii
MCO16G126 Micromonas commoda
MD02G1003600 Malus domestica
MD15G1146900 Malus domestica
Medtr4g080300 Medicago truncatula
MELO3C022586.2 Cucumis melo
Migut.F00861 Erythranthe guttata
Nitab4.5_0000812g0140 Nicotiana tabacum
Nitab4.5_0006279g0040 Nicotiana tabacum
Nn7g38180 Nelumbo nucifera
Oeu022452.1 Olea europaea
Os02g0510100 Oryza sativa ssp. japonica
Os04g0388900 Oryza sativa ssp. japonica
Peaxi162Scf00003g04837 Petunia axillaris
Peaxi162Scf00483g00211 Petunia axillaris
PGR042G3106 Punica granatum
PGSC0003DMG400008371 Solanum tuberosum
Phvul.008G068400 Phaseolus vulgaris
Potri.008G078400 Populus trichocarpa
Potri.010G178700 Populus trichocarpa
Pp3c18_1280 Physcomitrium patens
Pp3c22_1090 Physcomitrium patens
PRCOL_00006325 Prasinoderma coloniale
Prupe.7G267700 Prunus persica
Psat7g164240 Pisum sativum
PSO170G5655 Papaver somniferum
PSO357G0486 Papaver somniferum
QL07p046700 Quercus lobata
RcHm_v2.0_Chr2g0084951 Rosa chinensis
RcHm_v2.0_Chr7g0189461 Rosa chinensis
Rhsim02G0086200 Rhododendron simsii
Rhsim02G0086900 Rhododendron simsii
Sabra08G0058200 Salix brachista
Sabra10G0137100 Salix brachista
SalBow3G0834 Salvia bowleyana
SalBow4G2087 Salvia bowleyana
Sc13g0007390 Simmondsia chinensis
Sed0015212 Sechium edule
SGA_v2.0_scaffold292G47391 Striga asiatica
SMO197G0107 Selaginella moellendorffii
Solyc10g078450.2 Solanum lycopersicum
Sopen10g029110 Solanum pennellii
Sp4g25890 Schrenkiella parvula
Sp5g03330 Schrenkiella parvula
TAR365G0334 Trochodendron aralioides
TAR636G2830 Trochodendron aralioides
THA.LOC104802338 Tarenaya hassleriana
THA.LOC104805002 Tarenaya hassleriana
Thecc.04G161800 Theobroma cacao
Thhalv10006338m.g Eutrema salsugineum
TPR.G30476 Trifolium pratense
TPR.G40363 Trifolium pratense
TWI15G0001 Tripterygium wilfordii
TWI15G1072 Tripterygium wilfordii
TWI60G1208 Tripterygium wilfordii
unitig_699.g19769 Utricularia gibba
vmacro15702 Vaccinium macrocarpon
Zm00001eb421160 Zea mays

User provided reference genes

Program Settings