Gene: Thecc.04G161800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.04G161800
  • Transcript Identifier Thecc.04G161800.1
  • Gene Type Coding gene
  • Location Chromosome_4 : 26180279-26181354 : negative

Gene Family Information

  • ID HOM05D004445
  • #Genes/#Species 161/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.04G161800.v2.1
  • pacid 42023889
  • ancestorIdentifier Thecc1EG019826.CGDv1.1
  • ancestorIdentifier Thecc1EG019826t1.CGDv1.1

Descriptions

  • Description Small nuclear ribonucleoprotein family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G59810
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G43810

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010920 LSM domain superfamily
IPR016487 Sm-like protein Lsm6/SmF
IPR001163 LSM domain, eukaryotic/archaea-type
Mapman id Description
16.2.3.6 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm6