Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p08930 Brassica napus
Aa31LG2G21550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2162 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5663 Anthoceros agrestis
Actinidia09435 Actinidia chinensis
Actinidia20401 Actinidia chinensis
Ah.14g082400 Amaranthus hybridus
AL7G23380 Arabidopsis lyrata
Aqoxy7G01526 Aquilegia oxysepala
Aqoxy7G03864 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.SK3XBC Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T3DUTL Arachis hypogaea
AT4G29060 Arabidopsis thaliana
ATR0315G017 Amborella trichopoda
Atru.chr7.1389 Acer truncatum
AUR62010941 Chenopodium quinoa
AUR62021454 Chenopodium quinoa
BcaC07g38375 Brassica carinata
BcaC09g51686 Brassica carinata
BcaNung00450 Brassica carinata
BcaNung01334 Brassica carinata
BcaNung02884 Brassica carinata
BcaNung02885 Brassica carinata
BcaNung02886 Brassica carinata
BolC1t01006H Brassica oleracea
BolC8t48802H Brassica oleracea
BraA01t00839Z Brassica rapa
C01p10470 Brassica napus
C08p11290 Brassica napus
C08p11300 Brassica napus
CAN.G258.4 Capsicum annuum
CANSAT56G3189 Cannabis sativa
CARHR236800 Cardamine hirsuta
Carub.0007s1153 Capsella rubella
Ca_25549_v3 Cicer arietinum L.
CBR_g47124 Chara braunii
Cc06_g10060 Coffea canephora
CDE02G3981 Ceratophyllum demersum
CDE08G1325 Ceratophyllum demersum
Cfa003224 Carpinus fangiana
Ciclev10007553m.g Citrus clementina
Ciclev10010581m.g Citrus clementina
CiPaw.04G161500 Carya illinoinensis
ClCG06G008850 Citrullus lanatus
COL.COLO4_34806 Corchorus olitorius
Cpa.g.sc14.106 Carica papaya
Cpa.g.sc3091.1 Carica papaya
Cre12.g519180 Chlamydomonas reinhardtii
CsaV3_1G021840 Cucumis sativus L.
CSS0007554 Camellia sinensis var. sinensis
CSS0012218 Camellia sinensis var. sinensis
DCAR_012058 Daucus carota
Dinv41639 Davidia involucrata
Duzib150G0111 Durio zibethinus
Duzib168G2050 Durio zibethinus
ECA234G3475 Erigeron canadensis
EL10Ac8g18429 Beta vulgaris
Eucgr.C01279 Eucalyptus grandis
FAN19G0797 Fragaria x ananassa
FAN23G0635 Fragaria x ananassa
FAN26G0981 Fragaria x ananassa
FAN26G2080 Fragaria x ananassa
FAN28G0287 Fragaria x ananassa
FvH4_1g05650 Fragaria vesca
Glyma.01G145400 Glycine max
Glyma.08G036300 Glycine max
Glyma.09G193300 Glycine max
Gohir.A06G064700 Gossypium hirsutum
Gohir.D06G063300 Gossypium hirsutum
Gohir.D13G201700 Gossypium hirsutum
Gorai.010G073800 Gossypium raimondii
Gorai.013G230500 Gossypium raimondii
GSVIVG01015347001 Vitis vinifera
HanXRQChr10g0318741 Helianthus annuus
HanXRQChr12g0355051 Helianthus annuus
Haze_25784 Corylus avellana
Hma1.2p1_0945F.1_g240070 Hydrangea macrophylla
Hma1.2p1_1151F.1_g261850 Hydrangea macrophylla
HPP92_011254 Vanilla planifolia
Hund09224 Selenicereus undatus
Lalb_Chr14g0371681 Lupinus albus
Lalb_Chr24g0397481 Lupinus albus
Lj2g0008578 Lotus japonicus
Lj7A657T48 Lonicera japonica
Lsat_1_v5_gn_5_147760 Lactuca sativa
Manes.03G024100 Manihot esculenta
Manes.16G112600 Manihot esculenta
Mapoly0191s0001 Marchantia polymorpha
MBI01_g38799_MAGBIO Magnolia biondii
MCO09G542 Micromonas commoda
MCO11G836 Micromonas commoda
MD02G1057500 Malus domestica
MD15G1191900 Malus domestica
Medtr0428s0020 Medicago truncatula
Medtr2g039780 Medicago truncatula
Medtr2g039790 Medicago truncatula
Medtr6g027070 Medicago truncatula
Medtr6g066260 Medicago truncatula
Medtr6g081090 Medicago truncatula
Medtr6g087190 Medicago truncatula
Medtr6g087270 Medicago truncatula
Medtr6g087300 Medicago truncatula
Medtr6g088240 Medicago truncatula
Medtr6g088270 Medicago truncatula
Medtr6g488290 Medicago truncatula
MELO3C024701.2 Cucumis melo
Migut.J01138 Erythranthe guttata
Migut.K00492 Erythranthe guttata
MSTRG.19573 Avicennia marina
Nitab4.5_0000823g0030 Nicotiana tabacum
Nitab4.5_0002431g0020 Nicotiana tabacum
Nn3g18135 Nelumbo nucifera
Oeu011770.1 Olea europaea
Oeu060218.1 Olea europaea
Os12g0541500 Oryza sativa ssp. japonica
Peaxi162Scf00231g00054 Petunia axillaris
Peaxi162Scf00665g00018 Petunia axillaris
PGR142G2866 Punica granatum
PGSC0003DMG400003138 Solanum tuberosum
Phvul.004G168100 Phaseolus vulgaris
Potri.018G083900 Populus trichocarpa
Pp3c13_21470 Physcomitrium patens
Pp3c3_11830 Physcomitrium patens
Pp3c3_11840 Physcomitrium patens
PRCOL_00000201 Prasinoderma coloniale
PRCOL_00005744 Prasinoderma coloniale
Prupe.7G225300 Prunus persica
Prupe.7G225400 Prunus persica
Psat1g044600 Pisum sativum
PSO210G1769 Papaver somniferum
PSO210G7660 Papaver somniferum
QL02p044736 Quercus lobata
QL11p051993 Quercus lobata
RcHm_v2.0_Chr2g0091281 Rosa chinensis
Rhsim05G0043600 Rhododendron simsii
Sabra18G0072200 Salix brachista
SalBow6G6960 Salvia bowleyana
Sc18g0001370 Simmondsia chinensis
Sed0004305 Sechium edule
Sed0026728 Sechium edule
SEGI_05158 Sequoiadendron giganteum
SGA_v2.0_scaffold30G12384 Striga asiatica
SMO197G0023 Selaginella moellendorffii
SMO364G0950 Selaginella moellendorffii
Solyc07g018360.3 Solanum lycopersicum
Sopen07g007510 Solanum pennellii
Sp7g27000 Schrenkiella parvula
TAR383G0462 Trochodendron aralioides
TAR636G3302 Trochodendron aralioides
THA.LOC104804019 Tarenaya hassleriana
THA.LOC104814561 Tarenaya hassleriana
Thecc.09G105600 Theobroma cacao
Thhalv10024316m.g Eutrema salsugineum
TPR.G34916 Trifolium pratense
TWI34G1278 Tripterygium wilfordii
TWI63G0403 Tripterygium wilfordii
unitig_37.g12650 Utricularia gibba
vmacro10876 Vaccinium macrocarpon
VMungo0464G0214 Vigna mungo
VMungo1080G1171 Vigna mungo
VMungo1127G0539 Vigna mungo
VMungo1215G1941 Vigna mungo
Zm00001eb091120 Zea mays
Zm00001eb091130 Zea mays
Zm00001eb110810 Zea mays
Zm00001eb356890 Zea mays

User provided reference genes

Program Settings