Gene: BcaC09g51686
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC09g51686
- Transcript Identifier BcaC09g51686
- Gene Type Coding gene
- Location ChrC09 : 45177157-45183684 : positive
Gene Family Information
- ID HOM05D004115
- #Genes/#Species 171/99
- Phylogenetic origin
- ID ORTHO05D005004
- #Genes/#Species 166/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006418 | IEA | InterPro | tRNA aminoacylation for protein translation | |
| GO:0006414 | IEA | InterPro | translational elongation | |
| GO:0006422 | IEA | InterPro | aspartyl-tRNA aminoacylation | |
| GO:0046686 | ISO | PLAZA Integrative Orthology | response to cadmium ion | AT4G29060 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000166 | IEA | InterPro | nucleotide binding | |
| GO:0004812 | IEA | InterPro | aminoacyl-tRNA ligase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003746 | IEA | InterPro | translation elongation factor activity | |
| GO:0004815 | IEA | InterPro | aspartate-tRNA ligase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G29060 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005737 | IEA | InterPro | cytoplasm | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT4G29060 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT4G29060 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT4G29060 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036402 | Elongation factor Ts, dimerisation domain superfamily |
| IPR004364 | Aminoacyl-tRNA synthetase, class II (D/K/N) |
| IPR002312 | Aspartyl/Asparaginyl-tRNA synthetase, class IIb |
| IPR009060 | UBA-like superfamily |
| IPR001816 | Translation elongation factor EFTs/EF1B |
| IPR004523 | Aspartate-tRNA synthetase, type 2 |
| IPR003029 | S1 domain |
| IPR012340 | Nucleic acid-binding, OB-fold |
| IPR004365 | OB-fold nucleic acid binding domain, AA-tRNA synthetase-type |
| IPR022967 | RNA-binding domain, S1 |
| IPR014039 | Translation elongation factor EFTs/EF1B, dimerisation |