Gene: Os12g0541500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os12g0541500
  • Transcript Identifier Os12t0541500-02
  • Gene Type Coding gene
  • Location chr12 : 21661642-21666026 : positive

Gene Family Information

  • ID HOM05D004115
  • #Genes/#Species 171/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os12t0541500-02
  • MSU-ID LOC_Os12g35630.3
  • MSU-ID LOC_Os12g35630.1
  • uniprot Q2QP54

Descriptions

  • Description Similar to Elongation factor Ts.
  • Description Similar to Chloroplast polyprotein of elongation factor Ts.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G29060
GO:0006414
IBA
IEA
GOA Databasetranslational elongation
GO:0006414
IEA
InterProtranslational elongation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003746
IBA
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISS
GOA DatabasemRNA binding
GO:1905538
ISS
GOA Databasepolysome binding
GO:0061770
ISS
GOA Databasetranslation elongation factor binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043253
ISS
GOA Databasechloroplast ribosome
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G29060
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G29060
GO:0009507
ISS
IEA
GOA Databasechloroplast
GO:0009536
IEA
GOA Databaseplastid
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009060 UBA-like superfamily
IPR036402 Elongation factor Ts, dimerisation domain superfamily
IPR001816 Translation elongation factor EFTs/EF1B
IPR003029 S1 domain
IPR012340 Nucleic acid-binding, OB-fold
IPR014039 Translation elongation factor EFTs/EF1B, dimerisation
IPR022967 RNA-binding domain, S1
Mapman id Description
17.7.4.2 Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Ts)