Gene: Pp3c13_21470

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c13_21470
  • Transcript Identifier Pp3c13_21470V3.3
  • Gene Type Coding gene
  • Location Chr13 : 15089264-15093482 : positive

Gene Family Information

  • ID HOM05D004115
  • #Genes/#Species 171/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c13_21470V3.3
  • pacid 32931783
  • alias Phypa_21938
  • alias Phpat.013G073500
  • alias Pp1s37_39V6
  • uniprot A0A2K1JMS0

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070125
IBA
GOA Databasemitochondrial translational elongation
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G29060
GO:0006414
IBA
IEA
GOA Databasetranslational elongation
GO:0006414
IEA
InterProtranslational elongation
GO:0006412
IEA
GOA Databasetranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT4G29060
GO:0003746
IBA
IEA
GOA Databasetranslation elongation factor activity
GO:0003746
IEA
InterProtranslation elongation factor activity
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G29060
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT4G29060
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G29060
GO:0005759
IBA
GOA Databasemitochondrial matrix
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036402 Elongation factor Ts, dimerisation domain superfamily
IPR009060 UBA-like superfamily
IPR001816 Translation elongation factor EFTs/EF1B
IPR022967 RNA-binding domain, S1
IPR012340 Nucleic acid-binding, OB-fold
IPR003029 S1 domain
IPR014039 Translation elongation factor EFTs/EF1B, dimerisation
IPR015940 Ubiquitin-associated domain
Mapman id Description
17.7.4.2 Protein biosynthesis.organelle machinery.translation elongation.elongation factor (EF-Ts)