Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p23950 Brassica napus
A03p23960 Brassica napus
A05p03590 Brassica napus
Aa31LG10G13480 Aethionema arabicum
Aa31LG1G24900 Aethionema arabicum
Aa31LG1G24910 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3330 Anthoceros agrestis
Actinidia10839 Actinidia chinensis
Actinidia31515 Actinidia chinensis
Ah.12g054170 Amaranthus hybridus
Ah.12g054180 Amaranthus hybridus
Ah.14g083550 Amaranthus hybridus
AL4G41740 Arabidopsis lyrata
AL4G41750 Arabidopsis lyrata
AL5G40810 Arabidopsis lyrata
Aqoxy7G00694 Aquilegia oxysepala
Aqoxy7G00850 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.HAI1EF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Y2K32V Arachis hypogaea
AT2G43090 Arabidopsis thaliana
AT2G43100 Arabidopsis thaliana
AT3G58990 Arabidopsis thaliana
ATR0693G063 Amborella trichopoda
ATR0693G400 Amborella trichopoda
Atru.chr9.1286 Acer truncatum
AUR62007106 Chenopodium quinoa
AUR62007107 Chenopodium quinoa
AUR62019969 Chenopodium quinoa
BcaB01g00650 Brassica carinata
BcaB01g01073 Brassica carinata
BcaB05g25308 Brassica carinata
BcaC01g01539 Brassica carinata
BcaC01g05264 Brassica carinata
BcaC02g12414 Brassica carinata
BcaC02g12415 Brassica carinata
BcaNung03538 Brassica carinata
BcaNung03539 Brassica carinata
BolC3t15222H Brassica oleracea
BolC4t22054H Brassica oleracea
BolC4t22055H Brassica oleracea
BraA03t11610Z Brassica rapa
BraA05t19344Z Brassica rapa
BraA05t19345Z Brassica rapa
C03p28570 Brassica napus
C03p28580 Brassica napus
C04p04150 Brassica napus
CAN.G62.23 Capsicum annuum
CANSAT21G2552 Cannabis sativa
CARHR138160 Cardamine hirsuta
CARHR138170 Cardamine hirsuta
CARHR169370 Cardamine hirsuta
CARHR169410 Cardamine hirsuta
Carub.0002s0595 Capsella rubella
Carub.0004s2557 Capsella rubella
Carub.0004s2558 Capsella rubella
Carub.0005s2573 Capsella rubella
Carub.0005s2576 Capsella rubella
Ca_20428_v3 Cicer arietinum L.
Cc08_g12220 Coffea canephora
CDE11G0227 Ceratophyllum demersum
CDE11G0751 Ceratophyllum demersum
Cfa019694 Carpinus fangiana
Ciclev10021871m.g Citrus clementina
CiPaw.16G091100 Carya illinoinensis
ClCG01G004210 Citrullus lanatus
COL.COLO4_08312 Corchorus olitorius
COL.COLO4_34273 Corchorus olitorius
Cpa.g.sc29.188 Carica papaya
Cre06.g252650 Chlamydomonas reinhardtii
CsaV3_5G004360 Cucumis sativus L.
CsaV3_5G004400 Cucumis sativus L.
CSS0047405 Camellia sinensis var. sinensis
DCAR_002274 Daucus carota
DCAR_008502 Daucus carota
Dinv21650 Davidia involucrata
Dinv39162 Davidia involucrata
Duzib052G0353 Durio zibethinus
ECA240G2077 Erigeron canadensis
EL10Ac5g12362 Beta vulgaris
EL10Ac5g12363 Beta vulgaris
FAN04G2897 Fragaria x ananassa
FAN08G2273 Fragaria x ananassa
FAN13G0727 Fragaria x ananassa
FAN18G1702 Fragaria x ananassa
FvH4_5g19250 Fragaria vesca
Glyma.07G032200 Glycine max
Glyma.08G210500 Glycine max
Gohir.A03G168700 Gossypium hirsutum
Gohir.A04G110300 Gossypium hirsutum
Gohir.D02G191900 Gossypium hirsutum
Gohir.D04G150500 Gossypium hirsutum
Gohir.D04G150600 Gossypium hirsutum
Gorai.005G214700 Gossypium raimondii
Gorai.012G137200 Gossypium raimondii
GSVIVG01007403001 Vitis vinifera
HanXRQChr03g0088791 Helianthus annuus
HanXRQChr13g0417841 Helianthus annuus
Haze_18794 Corylus avellana
HPP92_020921 Vanilla planifolia
Hund14573 Selenicereus undatus
Lalb_Chr25g0279491 Lupinus albus
Lj2C222T2 Lonicera japonica
Lj3g0007947 Lotus japonicus
Lj8A264G55 Lonicera japonica
Lj8A266T18 Lonicera japonica
Lj8A267T12 Lonicera japonica
Lsat_1_v5_gn_5_55401 Lactuca sativa
Lsat_1_v5_gn_6_92521 Lactuca sativa
Lsat_1_v5_gn_7_1160 Lactuca sativa
Manes.01G082700 Manihot esculenta
Mapoly0001s0104 Marchantia polymorpha
MD04G1062100 Malus domestica
MD06G1055800 Malus domestica
Medtr4g011180 Medicago truncatula
MELO3C005518.2 Cucumis melo
Migut.A01125 Erythranthe guttata
MSTRG.12117 Avicennia marina
Nitab4.5_0000618g0090 Nicotiana tabacum
Nitab4.5_0001410g0090 Nicotiana tabacum
Nitab4.5_0002372g0010 Nicotiana tabacum
Nitab4.5_0002881g0050 Nicotiana tabacum
Nitab4.5_0002881g0130 Nicotiana tabacum
Nn6g33894 Nelumbo nucifera
Oeu040710.1 Olea europaea
Oeu047732.1 Olea europaea
Os02g0655300 Oryza sativa ssp. japonica
Peaxi162Scf01022g00023 Petunia axillaris
PGR031G2826 Punica granatum
PGSC0003DMG400024154 Solanum tuberosum
Phvul.010G153800 Phaseolus vulgaris
Potri.003G107800 Populus trichocarpa
Pp3c14_19120 Physcomitrium patens
Pp3c1_29090 Physcomitrium patens
Prupe.5G066300 Prunus persica
Psat7g255640 Pisum sativum
PSO210G0624 Papaver somniferum
PSO210G4930 Papaver somniferum
QL12p011587 Quercus lobata
Rhsim03G0103100 Rhododendron simsii
Rhsim05G0121600 Rhododendron simsii
Rhsim07G0110300 Rhododendron simsii
Sabra03G0074600 Salix brachista
SalBow1G0783 Salvia bowleyana
SalBow1G7183 Salvia bowleyana
SalBow3G1561 Salvia bowleyana
SalBow6G1227 Salvia bowleyana
Sc10g0005540 Simmondsia chinensis
Sed0004379 Sechium edule
Sed0021243 Sechium edule
SEGI_19785 Sequoiadendron giganteum
SGA_v2.0_scaffold104G30172 Striga asiatica
SHI09309 Sapria himalayana
SMO274G0039 Selaginella moellendorffii
Solyc06g060790.1 Solanum lycopersicum
Sopen06g020930 Solanum pennellii
Sp4g25220 Schrenkiella parvula
Sp4g25230 Schrenkiella parvula
TAR629G1833 Trochodendron aralioides
THA.LOC104803472 Tarenaya hassleriana
THA.LOC104824129 Tarenaya hassleriana
Thecc.02G150400 Theobroma cacao
Thhalv10017125m.g Eutrema salsugineum
Thhalv10017142m.g Eutrema salsugineum
TPR.G10893 Trifolium pratense
TWI60G0584 Tripterygium wilfordii
TWI81G0703 Tripterygium wilfordii
unitig_899.g15440 Utricularia gibba
VMungo0331G1163 Vigna mungo
Zm00001eb249330 Zea mays

User provided reference genes

Program Settings