Gene: Sopen06g020930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g020930
  • Transcript Identifier Sopen06g020930.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 48675641-48676408 : negative

Gene Family Information

  • ID HOM05D004152
  • #Genes/#Species 170/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g020930.1

Descriptions

  • Description Aconitase/3-isopropylmalate dehydratase protein | FUNCTIONS IN: hydro-lyase activity, 3-isopropylmalate dehydratase activity | INVOLVED IN: metabolic process | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: 3-isopropylmalate dehydratase, small subunit-like , Aconitase-like core , Aconitase/3-isopropylmalate dehydratase, swivel | BEST Arabidopsis thaliana protein match is: isopropylmalate isomerase 1 .
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009098
ISO
PLAZA Integrative Orthologyleucine biosynthetic process AT2G43090
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT2G43090
GO:0019761
ISO
PLAZA Integrative Orthologyglucosinolate biosynthetic process AT3G58990
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G43090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016836
IEA
InterProhydro-lyase activity
GO:0003861
ISO
PLAZA Integrative Orthology3-isopropylmalate dehydratase activity AT3G58990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G58990
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G43090
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G58990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel
IPR011827 Hydrolyase LeuD/HacB/DmdB
IPR033940 3-isopropylmalate dehydratase, swivel domain
Mapman id Description
30.1.1.3.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.small subunit
4.1.3.2.5.2.2 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.small subunit