Gene: Carub.0005s2573
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0005s2573
- Transcript Identifier Carub.0005s2573.1
- Gene Type Coding gene
- Location scaffold_5 : 12083430-12084212 : negative
Gene Family Information
- ID HOM05D004152
- #Genes/#Species 170/92
- Phylogenetic origin
- ID ORTHO05D004878
- #Genes/#Species 169/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0005s2573.v1.1
- pacid 39225073
- synonym Carubv10019269m.g
Descriptions
- Description PTHR11670:SF6 - 3-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 1-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019761 | ISO | PLAZA Integrative Orthology | glucosinolate biosynthetic process | AT3G58990 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016836 | ISO | PLAZA Homology (enrichment) | hydro-lyase activity | HOM05D004152 |
| GO:0003861 | ISO | PLAZA Integrative Orthology | 3-isopropylmalate dehydratase activity | AT3G58990 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G58990 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT3G58990 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 30.1.1.3.2 | Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.small subunit |
| 4.1.3.2.5.2.2 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.small subunit |