Gene: Lsat_1_v5_gn_6_92521

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_92521
  • Transcript Identifier Lsat_1_v5_gn_6_92521.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 152865240-152866675 : positive

Gene Family Information

  • ID HOM05D004152
  • #Genes/#Species 170/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_92521.v5
  • pacid 38936555

Descriptions

  • Description K01704 - 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit (leuD)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009098
ISO
PLAZA Integrative Orthologyleucine biosynthetic process AT2G43090
GO:0048229
ISO
PLAZA Integrative Orthologygametophyte development AT2G43090
GO:0019761
ISO
PLAZA Integrative Orthologyglucosinolate biosynthetic process AT3G58990
GO:0009658
ISO
PLAZA Integrative Orthologychloroplast organization AT2G43090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016836
ISO
PLAZA Homology (enrichment)hydro-lyase activity HOM05D004152
GO:0003861
ISO
PLAZA Integrative Orthology3-isopropylmalate dehydratase activity AT3G58990

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G58990
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G43090
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G58990

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel
Mapman id Description
30.1.1.3.2 Clade-specific metabolism.Brassicaceae.glucosinolate biosynthesis.methylthioalkylmalate isomerase heterodimer.small subunit
4.1.3.2.5.2.2 Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.leucine.isopropylmalate isomerase heterodimer.small subunit