Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p07400 Brassica napus
Aa31LG10G9870 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2622 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.982 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1182 Anthoceros agrestis
Actinidia02986 Actinidia chinensis
Actinidia13851 Actinidia chinensis
Actinidia26801 Actinidia chinensis
Actinidia29205 Actinidia chinensis
Ah.09g234270 Amaranthus hybridus
AL5G36324 Arabidopsis lyrata
AL5G36340 Arabidopsis lyrata
Aqoxy1G01641 Aquilegia oxysepala
Aqoxy2G04103 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.4JT818 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T81D7J Arachis hypogaea
AT3G55200 Arabidopsis thaliana
AT3G55220 Arabidopsis thaliana
ATR0820G062 Amborella trichopoda
Atru.chr12.571 Acer truncatum
AUR62002316 Chenopodium quinoa
AUR62002317 Chenopodium quinoa
AUR62002616 Chenopodium quinoa
AUR62022537 Chenopodium quinoa
AUR62023868 Chenopodium quinoa
AUR62035965 Chenopodium quinoa
AUR62044277 Chenopodium quinoa
BcaB02g07694 Brassica carinata
BcaC09g48162 Brassica carinata
BolC1t05325H Brassica oleracea
BraA01t04192Z Brassica rapa
CAN.G1557.8 Capsicum annuum
CAN.G98.10 Capsicum annuum
CANSAT56G1536 Cannabis sativa
CARHR289060 Cardamine hirsuta
Carub.0005s2186 Capsella rubella
Carub.0005s2188 Capsella rubella
Ca_11305_v3 Cicer arietinum L.
CBR_g32401 Chara braunii
CBR_g46869 Chara braunii
CBR_g50058 Chara braunii
Cc00_g13950 Coffea canephora
Cc00_g29200 Coffea canephora
CDE02G0853 Ceratophyllum demersum
CDE02G2560 Ceratophyllum demersum
CDE09G0269 Ceratophyllum demersum
Cfa001548 Carpinus fangiana
Ciclev10030532m.g Citrus clementina
CiPaw.01G281100 Carya illinoinensis
CiPaw.02G179700 Carya illinoinensis
ClCG02G013500 Citrullus lanatus
COL.COLO4_10911 Corchorus olitorius
Cpa.g.sc1.324 Carica papaya
Cre08.g372800 Chlamydomonas reinhardtii
CsaV3_5G006650 Cucumis sativus L.
CSS0019699 Camellia sinensis var. sinensis
DCAR_015231 Daucus carota
DCAR_019162 Daucus carota
Dinv25952 Davidia involucrata
Dinv31402 Davidia involucrata
Duzib114G0516 Durio zibethinus
Duzib128G1000 Durio zibethinus
ECA233G0861 Erigeron canadensis
ECA233G4736 Erigeron canadensis
EL10Ac2g03470 Beta vulgaris
EL10Ac3g06633 Beta vulgaris
Eucgr.J01165 Eucalyptus grandis
FAN01G1416 Fragaria x ananassa
FAN01G1516 Fragaria x ananassa
FAN03G1481 Fragaria x ananassa
FAN06G2419 Fragaria x ananassa
FAN06G4735 Fragaria x ananassa
FAN10G2700 Fragaria x ananassa
FAN10G2922 Fragaria x ananassa
FAN19G1456 Fragaria x ananassa
FAN23G1337 Fragaria x ananassa
FAN23G3063 Fragaria x ananassa
FAN26G2866 Fragaria x ananassa
FAN28G1205 Fragaria x ananassa
FAN28G1684 Fragaria x ananassa
FvH4_1g28630 Fragaria vesca
FvH4_7g20980 Fragaria vesca
Glyma.10G291300 Glycine max
Glyma.20G240500 Glycine max
Gohir.A05G351700 Gossypium hirsutum
Gohir.A10G210700 Gossypium hirsutum
Gohir.D04G061100 Gossypium hirsutum
Gohir.D10G219000 Gossypium hirsutum
Gorai.011G245700 Gossypium raimondii
Gorai.012G068000 Gossypium raimondii
GSVIVG01005970001 Vitis vinifera
HanXRQChr08g0228691 Helianthus annuus
HanXRQChr08g0234761 Helianthus annuus
HanXRQChr08g0234771 Helianthus annuus
HanXRQChr14g0437201 Helianthus annuus
Haze_16985 Corylus avellana
Haze_26580 Corylus avellana
Hma1.2p1_3477F.1_g336300 Hydrangea macrophylla
HPP92_016709 Vanilla planifolia
HPP92_016710 Vanilla planifolia
HPP92_027161 Vanilla planifolia
Hund19994 Selenicereus undatus
Lalb_Chr02g0143971 Lupinus albus
Lalb_Chr06g0164191 Lupinus albus
Lj5g0001158 Lotus japonicus
Lj8A91T61 Lonicera japonica
Lsat_1_v5_gn_8_18261 Lactuca sativa
Manes.07G109100 Manihot esculenta
Manes.10G036500 Manihot esculenta
Mapoly0009s0019 Marchantia polymorpha
MCO14G333 Micromonas commoda
MD01G1119800 Malus domestica
MD07G1188800 Malus domestica
MD07G1189000 Malus domestica
Medtr1g115525 Medicago truncatula
Medtr4g115500 Medicago truncatula
Medtr4g115810 Medicago truncatula
Medtr6g013290 Medicago truncatula
MELO3C023823.2 Cucumis melo
Migut.N02978 Erythranthe guttata
MSTRG.22089 Avicennia marina
Nitab4.5_0000426g0110 Nicotiana tabacum
Nitab4.5_0012497g0010 Nicotiana tabacum
Nn2g10520 Nelumbo nucifera
Nn2g12856 Nelumbo nucifera
Oeu016870.1 Olea europaea
Os02g0137400 Oryza sativa ssp. japonica
Peaxi162Scf00060g00511 Petunia axillaris
PGR142G3382 Punica granatum
PGSC0003DMG400030187 Solanum tuberosum
Phvul.007G009600 Phaseolus vulgaris
Potri.008G048900 Populus trichocarpa
Potri.010G212100 Populus trichocarpa
Pp3c12_11240 Physcomitrium patens
Pp3c16_16800 Physcomitrium patens
Pp3c4_5190 Physcomitrium patens
PRCOL_00000086 Prasinoderma coloniale
Prupe.2G226500 Prunus persica
Psat5g199040 Pisum sativum
Psat6g237600 Pisum sativum
Psat7g159880 Pisum sativum
Psat7g159960 Pisum sativum
PSO339G2718 Papaver somniferum
PSO384G4083 Papaver somniferum
QL08p057820 Quercus lobata
RcHm_v2.0_Chr1g0365341 Rosa chinensis
RcHm_v2.0_Chr1g0365361 Rosa chinensis
RcHm_v2.0_Chr3g0492631 Rosa chinensis
Rhsim09G0157900 Rhododendron simsii
Rhsim09G0158100 Rhododendron simsii
Sabra08G0035000 Salix brachista
Sabra10G0164200 Salix brachista
Sabra10G0164300 Salix brachista
SalBow7G2745 Salvia bowleyana
Sc06g0001910 Simmondsia chinensis
Sed0017085 Sechium edule
Sed0026990 Sechium edule
SEGI_11055 Sequoiadendron giganteum
SEGI_11921 Sequoiadendron giganteum
SGA_v2.0_scaffold31G12606 Striga asiatica
SGA_v2.0_scaffold364G49990 Striga asiatica
SGA_v2.0_scaffold54G19634 Striga asiatica
SMO116G0157 Selaginella moellendorffii
Solyc04g010260.3 Solanum lycopersicum
Sopen04g005450 Solanum pennellii
Sp5g07240 Schrenkiella parvula
TAR369G0684 Trochodendron aralioides
THA.LOC104810010 Tarenaya hassleriana
THA.LOC104824257 Tarenaya hassleriana
Thecc.10G059000 Theobroma cacao
Thhalv10006588m.g Eutrema salsugineum
TPR.G13999 Trifolium pratense
TPR.G14006 Trifolium pratense
TPR.G35191 Trifolium pratense
TWI63G0503 Tripterygium wilfordii
unitig_736.g22269 Utricularia gibba
VMungo0251G2352 Vigna mungo
VMungo0720G0614 Vigna mungo
VMungo1215G3139 Vigna mungo
Zm00001eb101730 Zea mays
Zm00001eb128630 Zea mays
Zm00001eb163410 Zea mays
Zm00001eb163420 Zea mays
Zm00001eb163430 Zea mays
Zm00001eb231820 Zea mays

User provided reference genes

Program Settings