Gene: Thecc.10G059000

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.10G059000
  • Transcript Identifier Thecc.10G059000.2
  • Gene Type Coding gene
  • Location Chromosome_10 : 3312302-3316638 : positive

Gene Family Information

  • ID HOM05D003635
  • #Genes/#Species 188/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.10G059000.v2.1
  • pacid 42024620
  • ancestorIdentifier Thecc1EG042977.CGDv1.1
  • ancestorIdentifier Thecc1EG042977t1.CGDv1.1

Descriptions

  • Description Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055046
ISO
PLAZA Integrative Orthologymicrogametogenesis AT3G55220
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G55220
GO:0009846
ISO
PLAZA Integrative Orthologypollen germination AT3G55220
GO:0048481
ISO
PLAZA Integrative Orthologyplant ovule development AT3G55220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003676
IEA
InterPronucleic acid binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR004871 Cleavage/polyadenylation specificity factor, A subunit, C-terminal
IPR018846 Cleavage/polyadenylation specificity factor, A subunit, N-terminal
Mapman id Description
16.2.1.2.4.3 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).splicing factor 3B complex.component SF3B3