Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p25850 Brassica napus
A03p45780 Brassica napus
A04p17710 Brassica napus
A04p17720 Brassica napus
A04p25600 Brassica napus
A08p03500 Brassica napus
Aa31LG7G15070 Aethionema arabicum
Aa31LG8G13750 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1727 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1846 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1852 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1864 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1865 Anthoceros agrestis
Actinidia00556 Actinidia chinensis
Actinidia02233 Actinidia chinensis
Actinidia11756 Actinidia chinensis
Actinidia11757 Actinidia chinensis
Actinidia27876 Actinidia chinensis
Actinidia27877 Actinidia chinensis
Ah.01g009440 Amaranthus hybridus
Ah.01g019080 Amaranthus hybridus
AL3G52550 Arabidopsis lyrata
AL3G52560 Arabidopsis lyrata
AL4G10630 Arabidopsis lyrata
AL4G16130 Arabidopsis lyrata
Aqoxy5G01532 Aquilegia oxysepala
Aqoxy5G01538 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.S1J40P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XRRC6E Arachis hypogaea
AT2G16390 Arabidopsis thaliana
AT2G21450 Arabidopsis thaliana
AT2G21455 Arabidopsis thaliana
AT3G31900 Arabidopsis thaliana
AT3G32280 Arabidopsis thaliana
AT3G32330 Arabidopsis thaliana
ATR0665G425 Amborella trichopoda
Atru.chr5.3086 Acer truncatum
AUR62010106 Chenopodium quinoa
AUR62011279 Chenopodium quinoa
AUR62011280 Chenopodium quinoa
AUR62013100 Chenopodium quinoa
AUR62016777 Chenopodium quinoa
AUR62016778 Chenopodium quinoa
BcaB04g17070 Brassica carinata
BcaB06g27144 Brassica carinata
BcaB06g28665 Brassica carinata
BcaB06g28666 Brassica carinata
BcaB08g34646 Brassica carinata
BcaC01g03023 Brassica carinata
BcaC02g07841 Brassica carinata
BolC3t17979H Brassica oleracea
BolC4t27758H Brassica oleracea
BraA03t12293Z Brassica rapa
BraA03t13708Z Brassica rapa
BraA04t18064Z Brassica rapa
C03p57010 Brassica napus
C04p62740 Brassica napus
CAN.G1544.11 Capsicum annuum
CAN.G9.13 Capsicum annuum
CANSAT11G1287 Cannabis sativa
CANSAT11G1508 Cannabis sativa
CARHR106640 Cardamine hirsuta
CARHR112360 Cardamine hirsuta
CARHR113450 Cardamine hirsuta
CARHR113460 Cardamine hirsuta
CARHR116670 Cardamine hirsuta
CARHR120260 Cardamine hirsuta
Carub.0003s3016 Capsella rubella
Carub.0004s0050 Capsella rubella
Carub.0004s0460 Capsella rubella
Ca_23901_v3 Cicer arietinum L.
CBR_g19871 Chara braunii
CBR_g28037 Chara braunii
Cc00_g19470 Coffea canephora
Cc02_g17200 Coffea canephora
CDE03G0261 Ceratophyllum demersum
CDE03G0361 Ceratophyllum demersum
CDE06G0228 Ceratophyllum demersum
CDE06G1623 Ceratophyllum demersum
Ciclev10027795m.g Citrus clementina
CiPaw.05G070200 Carya illinoinensis
CiPaw.06G132300 Carya illinoinensis
ClCG11G004110 Citrullus lanatus
COL.COLO4_15200 Corchorus olitorius
COL.COLO4_25995 Corchorus olitorius
COL.COLO4_25996 Corchorus olitorius
COL.COLO4_25997 Corchorus olitorius
Cpa.g.sc1026.2 Carica papaya
CsaV3_2G015070 Cucumis sativus L.
CSS0026816 Camellia sinensis var. sinensis
CSS0026935 Camellia sinensis var. sinensis
DCAR_001556 Daucus carota
DCAR_003655 Daucus carota
DCAR_028963 Daucus carota
DCAR_030464 Daucus carota
Dinv23485 Davidia involucrata
Dinv42034 Davidia involucrata
Duzib248G0474 Durio zibethinus
ECA234G1026 Erigeron canadensis
ECA234G2709 Erigeron canadensis
ECA240G2411 Erigeron canadensis
EL10Ac9g21454 Beta vulgaris
EL10Ac9g21686 Beta vulgaris
Eucgr.G01701 Eucalyptus grandis
FAN15G1535 Fragaria x ananassa
FAN24G2419 Fragaria x ananassa
FAN27G2965 Fragaria x ananassa
FvH4_2g09760 Fragaria vesca
Glyma.12G236100 Glycine max
Glyma.13G201800 Glycine max
Gohir.A12G042200 Gossypium hirsutum
Gohir.A13G032200 Gossypium hirsutum
Gohir.D12G030100 Gossypium hirsutum
Gohir.D13G030500 Gossypium hirsutum
Gorai.008G031000 Gossypium raimondii
Gorai.013G034700 Gossypium raimondii
GSVIVG01023832001 Vitis vinifera
GSVIVG01024225001 Vitis vinifera
GSVIVG01024512001 Vitis vinifera
HanXRQChr03g0069371 Helianthus annuus
HanXRQChr03g0069421 Helianthus annuus
HanXRQChr12g0374341 Helianthus annuus
Haze_02322 Corylus avellana
Haze_02328 Corylus avellana
Haze_02329 Corylus avellana
HPP92_022391 Vanilla planifolia
HPP92_022392 Vanilla planifolia
Hund06249 Selenicereus undatus
Hund06399 Selenicereus undatus
Hund17605 Selenicereus undatus
Lalb_Chr01g0008001 Lupinus albus
Lalb_Chr19g0132271 Lupinus albus
Lj1g0015165 Lotus japonicus
Lj3g0000422 Lotus japonicus
Lj5A193T102 Lonicera japonica
Lj5g0003943 Lotus japonicus
Lj5g0009315 Lotus japonicus
Lj5g0015696 Lotus japonicus
Lj6g0007539 Lotus japonicus
Lj6g0012773 Lotus japonicus
Lj7A123T30 Lonicera japonica
Lj7A123T31 Lonicera japonica
Lj7P123T25 Lonicera japonica
Lsat_1_v5_gn_5_120421 Lactuca sativa
Lsat_1_v5_gn_9_107821 Lactuca sativa
Manes.04G086500 Manihot esculenta
Manes.11G082500 Manihot esculenta
Mapoly0018s0003 Marchantia polymorpha
Mapoly0043s0033 Marchantia polymorpha
Mapoly0112s0028 Marchantia polymorpha
Mapoly0126s0027 Marchantia polymorpha
MBI02_g44626_MAGBIO Magnolia biondii
MBI06_g27723_MAGBIO Magnolia biondii
MBI06_g27724_MAGBIO Magnolia biondii
MBI11_g32386_MAGBIO Magnolia biondii
MBI15_g29426_MAGBIO Magnolia biondii
MBI15_g42531_MAGBIO Magnolia biondii
MD05G1059900 Malus domestica
MD10G1068100 Malus domestica
Medtr2g437480 Medicago truncatula
Medtr8g037345 Medicago truncatula
MELO3C023332.2 Cucumis melo
Migut.B00205 Erythranthe guttata
MSTRG.16829 Avicennia marina
Nitab4.5_0003234g0070 Nicotiana tabacum
Nitab4.5_0012853g0020 Nicotiana tabacum
Nn1g05795 Nelumbo nucifera
Oeu041616.1 Olea europaea
Os03g0165266 Oryza sativa ssp. japonica
Os06g0255700 Oryza sativa ssp. japonica
Os07g0434500 Oryza sativa ssp. japonica
Os08g0243866 Oryza sativa ssp. japonica
Os08g0289400 Oryza sativa ssp. japonica
Peaxi162Scf00016g00426 Petunia axillaris
PGR042G0782 Punica granatum
PGR042G3366 Punica granatum
PGSC0003DMG400030952 Solanum tuberosum
Phvul.011G210600 Phaseolus vulgaris
Phvul.011G210800 Phaseolus vulgaris
Potri.004G159000 Populus trichocarpa
Potri.004G159100 Populus trichocarpa
Potri.009G120700 Populus trichocarpa
Pp3c1_36240 Physcomitrium patens
Pp3c2_3510 Physcomitrium patens
PRCOL_00006930 Prasinoderma coloniale
Prupe.8G089900 Prunus persica
Prupe.8G090000 Prunus persica
Psat4g193880 Pisum sativum
Psat7g126840 Pisum sativum
PSO063G2790 Papaver somniferum
PSO210G6882 Papaver somniferum
PSO700G0205 Papaver somniferum
PSO731G0040 Papaver somniferum
PSO782G2318 Papaver somniferum
PSO832G3117 Papaver somniferum
QL11p045293 Quercus lobata
QL11p045305 Quercus lobata
QL11p045326 Quercus lobata
RcHm_v2.0_Chr1g0330461 Rosa chinensis
RcHm_v2.0_Chr1g0330471 Rosa chinensis
RcHm_v2.0_Chr2g0120051 Rosa chinensis
RcHm_v2.0_Chr6g0266061 Rosa chinensis
RcHm_v2.0_Chr6g0266081 Rosa chinensis
Rhsim04G0037100 Rhododendron simsii
Rhsim05G0070700 Rhododendron simsii
Rhsim11G0180800 Rhododendron simsii
Sabra04G0106400 Salix brachista
Sabra04G0106500 Salix brachista
Sabra09G0093000 Salix brachista
Sc14g0002030 Simmondsia chinensis
Sed0003616 Sechium edule
Sed0009304 Sechium edule
SEGI_23418 Sequoiadendron giganteum
SGA_v2.0_scaffold58G20498 Striga asiatica
SHI05568 Sapria himalayana
SMO351G0197 Selaginella moellendorffii
Solyc01g109970.3 Solanum lycopersicum
Sopen01g052160 Solanum pennellii
Sp3g29660 Schrenkiella parvula
Sp4g15610 Schrenkiella parvula
TAR381G0568 Trochodendron aralioides
TAR381G1015 Trochodendron aralioides
TAR381G1393 Trochodendron aralioides
TAR625G0592 Trochodendron aralioides
THA.LOC104807870 Tarenaya hassleriana
THA.LOC104819623 Tarenaya hassleriana
Thecc.02G079900 Theobroma cacao
Thhalv10000722m.g Eutrema salsugineum
Thhalv10022532m.g Eutrema salsugineum
TPR.G1890 Trifolium pratense
TPR.G23932 Trifolium pratense
TWI75G0750 Tripterygium wilfordii
TWI79G0585 Tripterygium wilfordii
unitig_21.g20794 Utricularia gibba
unitig_21.g20795 Utricularia gibba
vmacro02076 Vaccinium macrocarpon
vmacro17455 Vaccinium macrocarpon
vmacro17927 Vaccinium macrocarpon
VMungo1127G0892 Vigna mungo
VMungo1127G1148 Vigna mungo
Zm00001eb173050 Zea mays
Zm00001eb416780 Zea mays

User provided reference genes

Program Settings