Gene: AT2G21450

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G21450
  • Transcript Identifier AT2G21450.2
  • Gene Type Coding gene
  • Location Chr2 : 9179622-9182785 : negative

Gene Family Information

  • ID HOM05D000725
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G21450.2
  • symbol CHR34
  • uniprot Q9SJT3

Descriptions

  • Description chromatin remodeling 34
  • Computational description chromatin remodeling 34 (CHR34); FUNCTIONS IN: helicase activity, DNA binding, nucleic acid binding, ATP binding; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021), SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: SNF2 domain-containing protein / helicase domain-containing protein (TAIR:AT2G16390.1); Has 13841 Blast hits to 12186 proteins in 1498 species: Archae - 60; Bacteria - 3626; Metazoa - 3317; Fungi - 3335; Plants - 1269; Viruses - 195; Other Eukaryotes - 2039 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
IEA
Gene Ontologygene silencing by RNA-directed DNA methylation
GO:0080188
IEA
InterProgene silencing by RNA-directed DNA methylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0140658
IEA
Gene OntologyATPase-dependent chromatin remodeler activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
GOA Databasenucleosome-dependent ATPase activity
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001650 Helicase, C-terminal
IPR044567 SNF2 domain-containing protein CLSY/DRD1
IPR000330 SNF2, N-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR038718 SNF2-like, N-terminal domain superfamily
Mapman id Description
35.1 not assigned.annotated