Gene: AT3G31900

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G31900
  • Transcript Identifier AT3G31900.1
  • Gene Type Coding gene
  • Location Chr3 : 12875071-12877422 : positive

Gene Family Information

  • ID HOM05D000725
  • #Genes/#Species 800/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G31900.1
  • uniprot F4J923

Descriptions

  • Description ATP-dependent helicase family protein
  • Computational description ATP-dependent helicase family protein; FUNCTIONS IN: DNA binding, ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: SNF2-related (InterPro:IPR000330); BEST Arabidopsis thaliana protein match is: ATP-dependent helicase family protein (TAIR:AT3G32280.1); Has 189 Blast hits to 187 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 46; Plants - 121; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080188
IEA
Gene Ontologygene silencing by RNA-directed DNA methylation
GO:0080188
IEA
InterProgene silencing by RNA-directed DNA methylation
GO:0008150
ND
GOA Databasebiological_process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0005524
ISO
PLAZA Homology (enrichment)ATP binding HOM05D000725
GO:0070615
ISO
PLAZA Homology (enrichment)nucleosome-dependent ATPase activity HOM05D000725

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044567 SNF2 domain-containing protein CLSY/DRD1
IPR038718 SNF2-like, N-terminal domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
35.1 not assigned.annotated