Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG1G2230 Aethionema arabicum
AL1G23730 Arabidopsis lyrata
AL2G12840 Arabidopsis lyrata
Aqoxy7G00621 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.8FF555 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NIEM70 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T092PF Arachis hypogaea
AT1G12400 Arabidopsis thaliana
AT1G62886 Arabidopsis thaliana
Atru.chr9.1458 Acer truncatum
BcaB03g13189 Brassica carinata
BolC5t29822H Brassica oleracea
BolC8t49170H Brassica oleracea
BolC9t56360H Brassica oleracea
BraA06t24109Z Brassica rapa
C09p35140 Brassica napus
CAN.G630.56 Capsicum annuum
CANSAT21G1174 Cannabis sativa
CARHR012690 Cardamine hirsuta
CARHR048860 Cardamine hirsuta
Carub.0001s1205 Capsella rubella
Carub.0002s0211 Capsella rubella
CBR_g51826 Chara braunii
Cc08_g13390 Coffea canephora
CDE11G0364 Ceratophyllum demersum
Cfa012029 Carpinus fangiana
Ciclev10024015m.g Citrus clementina
CiPaw.11G146300 Carya illinoinensis
ClCG00G001010 Citrullus lanatus
Cpa.g.sc29.74 Carica papaya
CsaV3_3G003270 Cucumis sativus L.
CSS0011774 Camellia sinensis var. sinensis
CSS0048716 Camellia sinensis var. sinensis
Dinv00491 Davidia involucrata
Dinv08998 Davidia involucrata
Duzib084G0284 Durio zibethinus
EL10Ac7g17105 Beta vulgaris
Eucgr.E00483 Eucalyptus grandis
FAN08G0246 Fragaria x ananassa
FAN12G2970 Fragaria x ananassa
FAN12G3233 Fragaria x ananassa
Glyma.05G239900 Glycine max
Glyma.08G047000 Glycine max
Gohir.A12G221900 Gossypium hirsutum
Gohir.D12G224400 Gossypium hirsutum
Gorai.008G240500 Gossypium raimondii
GSVIVG01019940001 Vitis vinifera
HanXRQChr02g0046221 Helianthus annuus
Hma1.2p1_0367F.1_g137100 Hydrangea macrophylla
Hma1.2p1_3825F.1_g337656 Hydrangea macrophylla
HPP92_014763 Vanilla planifolia
Lalb_Chr05g0222151 Lupinus albus
Lalb_Chr18g0049811 Lupinus albus
Lj4g0007995 Lotus japonicus
Lj4g0021147 Lotus japonicus
Lsat_1_v5_gn_6_9641 Lactuca sativa
Manes.02G032611 Manihot esculenta
Mapoly0088s0021 Marchantia polymorpha
MBI12_g10752_MAGBIO Magnolia biondii
MCO09G617 Micromonas commoda
MD04G1245800 Malus domestica
MD06G1064000 Malus domestica
MD12G1192500 Malus domestica
Medtr5g055880 Medicago truncatula
Medtr5g055890 Medicago truncatula
Migut.A00849 Erythranthe guttata
Migut.I00707 Erythranthe guttata
Nitab4.5_0000633g0050 Nicotiana tabacum
Nitab4.5_0005241g0010 Nicotiana tabacum
Nitab4.5_0007130g0020 Nicotiana tabacum
Nn1g01223 Nelumbo nucifera
Os05g0108500 Oryza sativa ssp. japonica
Os05g0198700 Oryza sativa ssp. japonica
Os07g0573600 Oryza sativa ssp. japonica
Peaxi162Scf00051g00316 Petunia axillaris
Peaxi162Scf00078g00627 Petunia axillaris
PGR031G3010 Punica granatum
PGSC0003DMG400003953 Solanum tuberosum
PGSC0003DMG400019087 Solanum tuberosum
Phvul.002G322200 Phaseolus vulgaris
Phvul.009G128900 Phaseolus vulgaris
Potri.001G116000 Populus trichocarpa
Potri.009G138800 Populus trichocarpa
Pp3c1_34050 Physcomitrium patens
Prupe.5G081100 Prunus persica
Prupe.5G081200 Prunus persica
PSO478G4385 Papaver somniferum
PSO782G0332 Papaver somniferum
QL12p015352 Quercus lobata
RcHm_v2.0_Chr7g0201071 Rosa chinensis
Rhsim02G0194900 Rhododendron simsii
Rhsim02G0196200 Rhododendron simsii
Rhsim07G0100800 Rhododendron simsii
Sabra01G0089100 Salix brachista
SalBow6G6939 Salvia bowleyana
Sc01g0009150 Simmondsia chinensis
Sed0003691 Sechium edule
SEGI_31798 Sequoiadendron giganteum
SGA_v2.0_scaffold37G14847 Striga asiatica
SGA_v2.0_scaffold511G52628 Striga asiatica
Solyc08g079610.3 Solanum lycopersicum
Sopen08g027960 Solanum pennellii
Sp1g11000 Schrenkiella parvula
THA.LOC104809439 Tarenaya hassleriana
Thecc.03G263200 Theobroma cacao
Thhalv10009271m.g Eutrema salsugineum
Thhalv10023898m.g Eutrema salsugineum
Thhalv10029420m.g Eutrema salsugineum
TPR.G38364 Trifolium pratense
TWI60G0887 Tripterygium wilfordii
TWI77G0094 Tripterygium wilfordii
Zm00001eb267070 Zea mays

User provided reference genes

Program Settings