Gene: PGR031G3010

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR031G3010
  • Transcript Identifier PGR031G3010.02
  • Gene Type Coding gene
  • Location NC_045127.1 : 47458110-47458465 : positive

Gene Family Information

  • ID HOM05D007086
  • #Genes/#Species 112/75
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031400880.1
  • name LOC116210888
  • name XM_031545020.1
  • id gene-LOC116210888
  • uniprot A0A2I0JIS7

Descriptions

  • product general transcription and DNA repair factor IIH subunit TFB5, transcript variant X2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000439
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035935 TFB5-like superfamily
IPR009400 TFIIH subunit TTDA/Tfb5
Mapman id Description
14.6.3.2.7 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB5
15.3.3.5.1.7 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB5