Gene: Sopen08g027960
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen08g027960
- Transcript Identifier Sopen08g027960.1
- Gene Type Coding gene
- Location Spenn-ch08 : 67636018-67636364 : positive
Gene Family Information
- ID HOM05D007086
- #Genes/#Species 112/75
- Phylogenetic origin
- ID ORTHO05D008927
- #Genes/#Species 112/76
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen08g027960.1
Descriptions
- Description Nucleotide excision repair, TFIIH, subunit TTDA | FUNCTIONS IN: DNA binding | INVOLVED IN: nucleotide-excision repair | LOCATED IN: endomembrane system | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleotide excision repair, TFIIH, subunit TTDA | BEST Arabidopsis thaliana protein match is: Nucleotide excision repair, TFIIH, subunit TTDA
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006289 | IEA | InterPro | nucleotide-excision repair | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000439 | IEA | InterPro | transcription factor TFIIH core complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 14.6.3.2.7 | DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB5 |
| 15.3.3.5.1.7 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB5 |