Gene: Os05g0198700

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0198700
  • Transcript Identifier Os05t0198700-01
  • Gene Type Coding gene
  • Location chr05 : 6135598-6136477 : positive

Gene Family Information

  • ID HOM05D007086
  • #Genes/#Species 112/75
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0198700-01
  • MSU-ID LOC_Os05g10980.1
  • uniprot B9FMY7

Descriptions

  • Description Similar to REX1 DNA Repair family protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
GOA Databasenucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0006366
IBA
GOA Databasetranscription by RNA polymerase II
GO:0006294
IBA
GOA Databasenucleotide-excision repair, preincision complex assembly
GO:0070816
IBA
GOA Databasephosphorylation of RNA polymerase II C-terminal domain

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0000439
IBA
IEA
GOA Databasetranscription factor TFIIH core complex
GO:0000439
IEA
InterProtranscription factor TFIIH core complex
GO:0005669
IBA
GOA Databasetranscription factor TFIID complex
GO:0005675
IBA
GOA Databasetranscription factor TFIIH holo complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR009400 TFIIH subunit TTDA/Tfb5
IPR035935 TFB5-like superfamily
Mapman id Description
14.6.3.2.7 DNA damage response.nucleotide excision repair (NER).multi-functional TFIIh complex.core module.subunit TFB5
15.3.3.5.1.7 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIh basal transcription factor complex.core module.component TFB5