Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p44410 Brassica napus
Aa31LG5G13150 Aethionema arabicum
Actinidia22879 Actinidia chinensis
Ah.14g086100 Amaranthus hybridus
AL3G12070 Arabidopsis lyrata
Aqoxy3G04298 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.N6ISZX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RNL3QM Arachis hypogaea
AT3G02680 Arabidopsis thaliana
ATR0618G008 Amborella trichopoda
Atru.chr1.2184 Acer truncatum
AUR62014236 Chenopodium quinoa
AUR62038458 Chenopodium quinoa
BcaC05g30516 Brassica carinata
BcaC05g30567 Brassica carinata
BcaNung05241 Brassica carinata
BolC5t35073H Brassica oleracea
BraA06t23296Z Brassica rapa
C09p75830 Brassica napus
CAN.G809.82 Capsicum annuum
CANSAT64G2566 Cannabis sativa
CARHR076680 Cardamine hirsuta
Carub.0003s0178 Capsella rubella
Ca_05740_v3 Cicer arietinum L.
CBR_g29321 Chara braunii
Cc07_g12560 Coffea canephora
CDE04G3361 Ceratophyllum demersum
Cfa008016 Carpinus fangiana
Ciclev10012792m.g Citrus clementina
Ciclev10013286m.g Citrus clementina
Ciclev10013450m.g Citrus clementina
CiPaw.04G006800 Carya illinoinensis
ClCG05G011330 Citrullus lanatus
COL.COLO4_13435 Corchorus olitorius
Cpa.g.sc108.22 Carica papaya
CsaV3_3G021130 Cucumis sativus L.
CSS0034206 Camellia sinensis var. sinensis
DCAR_014134 Daucus carota
Dinv24123 Davidia involucrata
Dinv28275 Davidia involucrata
Duzib138G1900 Durio zibethinus
ECA246G0244 Erigeron canadensis
EL10Ac6g14054 Beta vulgaris
Eucgr.B03794 Eucalyptus grandis
FAN08G2099 Fragaria x ananassa
FAN18G2665 Fragaria x ananassa
FvH4_5g39750 Fragaria vesca
Glyma.02G239200 Glycine max
Glyma.14G208100 Glycine max
Gohir.A12G053000 Gossypium hirsutum
Gohir.D12G051500 Gossypium hirsutum
Gorai.008G054800 Gossypium raimondii
GSVIVG01033201001 Vitis vinifera
HanXRQChr16g0532681 Helianthus annuus
Haze_14043 Corylus avellana
Hma1.2p1_0085F.1_g043920 Hydrangea macrophylla
Hma1.2p1_0085F.1_g043925 Hydrangea macrophylla
Hma1.2p1_0085F.1_g043960 Hydrangea macrophylla
Hma1.2p1_0085F.1_g043970 Hydrangea macrophylla
HPP92_015158 Vanilla planifolia
Hund12951 Selenicereus undatus
Lalb_Chr17g0345771 Lupinus albus
Lj4A249G52 Lonicera japonica
LjContig00141g0007295 Lotus japonicus
Lsat_1_v5_gn_3_69681 Lactuca sativa
Manes.01G126500 Manihot esculenta
MBI03_g13822_MAGBIO Magnolia biondii
MCO11G052 Micromonas commoda
MD09G1187400 Malus domestica
Medtr5g076180 Medicago truncatula
MELO3C020249.2 Cucumis melo
Migut.K01188 Erythranthe guttata
Migut.L00936 Erythranthe guttata
Migut.L00937 Erythranthe guttata
Migut.L00945 Erythranthe guttata
Migut.L00946 Erythranthe guttata
Migut.L00953 Erythranthe guttata
MSTRG.3663 Avicennia marina
Nitab4.5_0000108g0060 Nicotiana tabacum
Nitab4.5_0003580g0010 Nicotiana tabacum
Nn3g18626 Nelumbo nucifera
Nn3g18627 Nelumbo nucifera
Oeu060825.3 Olea europaea
Os10g0487300 Oryza sativa ssp. japonica
Peaxi162Scf00344g01815 Petunia axillaris
Peaxi162Scf00344g01816 Petunia axillaris
PGR102G0946 Punica granatum
PGSC0003DMG400017739 Solanum tuberosum
Phvul.008G242800 Phaseolus vulgaris
Potri.015G148300 Populus trichocarpa
Pp3c4_14090 Physcomitrium patens
Prupe.8G267600 Prunus persica
Psat2g048560 Pisum sativum
PSO063G7212 Papaver somniferum
PSO782G5584 Papaver somniferum
QL02p055474 Quercus lobata
QL02p056517 Quercus lobata
RcHm_v2.0_Chr7g0242051 Rosa chinensis
Rhsim10G0187300 Rhododendron simsii
Sabra15G0156900 Salix brachista
Sabra16G0321300 Salix brachista
Sabra16G0322200 Salix brachista
SalBow5G2177 Salvia bowleyana
Sc09g0004640 Simmondsia chinensis
Sed0010007 Sechium edule
SEGI_37812 Sequoiadendron giganteum
SGA_v2.0_scaffold45G17096 Striga asiatica
SHI09016 Sapria himalayana
SMO169G0207 Selaginella moellendorffii
Solyc02g081520.3 Solanum lycopersicum
Sopen02g026150 Solanum pennellii
Sp3g01710 Schrenkiella parvula
TAR629G1839 Trochodendron aralioides
Thecc.04G055900 Theobroma cacao
Thhalv10020468m.g Eutrema salsugineum
TPR.G15397 Trifolium pratense
TPR.G36125 Trifolium pratense
TWI77G0885 Tripterygium wilfordii
unitig_748.g7016 Utricularia gibba
vmacro20436 Vaccinium macrocarpon
VMungo0647G2139 Vigna mungo
Zm00001eb221260 Zea mays

User provided reference genes

Program Settings