Gene: SGA_v2.0_scaffold45G17096

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold45G17096
  • Transcript Identifier SGA_v2.0_scaffold45T17096
  • Gene Type Coding gene
  • Location scaffold45 : 776345-790704 : positive

Gene Family Information

  • ID HOM05D006560
  • #Genes/#Species 122/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product Pentatricopeptide repeat-containing protein, putative
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007095
ISO
PLAZA Homology (enrichment)mitotic G2 DNA damage checkpoint signaling HOM05D006560
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G02680
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G02680
GO:0071479
ISO
PLAZA Integrative Orthologycellular response to ionizing radiation AT3G02680
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT3G02680
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT3G02680
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT3G02680
GO:0006302
ISO
PLAZA Homology (enrichment)double-strand break repair HOM05D006560

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030870
ISO
PLAZA Homology (enrichment)Mre11 complex HOM05D006560

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002885 Pentatricopeptide repeat
IPR000253 Forkhead-associated (FHA) domain
IPR036420 BRCT domain superfamily
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR008984 SMAD/FHA domain superfamily
IPR001357 BRCT domain
Mapman id Description
13.3.5.3.1.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component NBS1
14.3.3.3 DNA damage response.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.component NBS1