Gene: Cc07_g12560

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc07_g12560
  • Transcript Identifier Cc07_g12560.1
  • Gene Type Coding gene
  • Location chr7 : 9301424-9307742 : positive

Gene Family Information

  • ID HOM05D006560
  • #Genes/#Species 122/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB G7K5Y3
  • UniProtKB I1MBP3
  • UniProtKB Q5RCV3
  • UniProtKB O60934
  • UniProtKB B9SIQ5
  • UniProtKB Q9R207
  • id GSCOCG00036857001

Descriptions

  • Description Putative nijmegen breakage syndrome 1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006302
IEA
InterProdouble-strand break repair
GO:0007095
IEA
InterPromitotic G2 DNA damage checkpoint signaling
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G02680
GO:0000724
ISO
PLAZA Integrative Orthologydouble-strand break repair via homologous recombination AT3G02680
GO:0071479
ISO
PLAZA Integrative Orthologycellular response to ionizing radiation AT3G02680
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT3G02680
GO:0007129
ISO
PLAZA Integrative Orthologyhomologous chromosome pairing at meiosis AT3G02680
GO:0006312
ISO
PLAZA Integrative Orthologymitotic recombination AT3G02680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030870
IEA
InterProMre11 complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR040227 Nibrin-related
IPR013908 DNA repair Nbs1, C-terminal
IPR008984 SMAD/FHA domain superfamily
IPR000253 Forkhead-associated (FHA) domain
IPR036420 BRCT domain superfamily
Mapman id Description
13.3.5.3.1.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic double strand break processing.MRE11-RAD50-NBS1 (MRN) complex.component NBS1
14.3.3.3 DNA damage response.homologous recombination repair (HR).DNA resection MRE11-RAD50-NBS1 (MRN) complex.component NBS1