Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p15770 Brassica napus
Aa31LG5G7380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2039 Anthoceros agrestis
Actinidia16074 Actinidia chinensis
Actinidia38827 Actinidia chinensis
Ah.08g220740 Amaranthus hybridus
Ah.15g099710 Amaranthus hybridus
AL4G24380 Arabidopsis lyrata
Aqoxy4G02661 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.F7MUQP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N1U5TX Arachis hypogaea
AT2G29630 Arabidopsis thaliana
ATR0564G389 Amborella trichopoda
Atru.chr3.4272 Acer truncatum
AUR62001683 Chenopodium quinoa
AUR62020099 Chenopodium quinoa
BcaB02g10267 Brassica carinata
BcaC02g11044 Brassica carinata
BolC4t23646H Brassica oleracea
BraA05t20491Z Brassica rapa
C04p21210 Brassica napus
CAN.G780.2 Capsicum annuum
CARHR122950 Cardamine hirsuta
Carub.0004s1072 Capsella rubella
Ca_14911_v3 Cicer arietinum L.
CBR_g30996 Chara braunii
Cc01_g13950 Coffea canephora
CDE03G0407 Ceratophyllum demersum
CDE04G0688 Ceratophyllum demersum
Cfa011654 Carpinus fangiana
Cfa015458 Carpinus fangiana
Ciclev10027988m.g Citrus clementina
CiPaw.13G080700 Carya illinoinensis
ClCG03G000880 Citrullus lanatus
COL.COLO4_19110 Corchorus olitorius
Cpa.g.sc112.53 Carica papaya
Cre05.g240850 Chlamydomonas reinhardtii
CsaV3_1G036050 Cucumis sativus L.
CSS0002743 Camellia sinensis var. sinensis
DCAR_007390 Daucus carota
Dinv28618 Davidia involucrata
Duzib168G0250 Durio zibethinus
ECA248G3465 Erigeron canadensis
EL10Ac7g16128 Beta vulgaris
Eucgr.B02273 Eucalyptus grandis
FAN11G1847 Fragaria x ananassa
FAN16G1207 Fragaria x ananassa
FAN21G1896 Fragaria x ananassa
FAN25G1982 Fragaria x ananassa
FvH4_3g38200 Fragaria vesca
Glyma.11G176200 Glycine max
Glyma.18G065700 Glycine max
Gohir.A03G049500 Gossypium hirsutum
Gohir.D03G117800 Gossypium hirsutum
Gorai.003G124300 Gossypium raimondii
GSVIVG01024789001 Vitis vinifera
HanXRQChr10g0298731 Helianthus annuus
HanXRQChr13g0388411 Helianthus annuus
Haze_24258 Corylus avellana
Haze_26876 Corylus avellana
Hma1.2p1_0227F.1_g096310 Hydrangea macrophylla
Hma1.2p1_0315F.1_g122560 Hydrangea macrophylla
Hma1.2p1_2020F.1_g311280 Hydrangea macrophylla
HPP92_012628 Vanilla planifolia
Hund04886 Selenicereus undatus
Lalb_Chr17g0345001 Lupinus albus
Lj1A141T56 Lonicera japonica
Lj6g0009842 Lotus japonicus
Lsat_1_v5_gn_5_158421 Lactuca sativa
Manes.01G164200 Manihot esculenta
Manes.02G121696 Manihot esculenta
Mapoly0078s0008 Marchantia polymorpha
MBI05_g03463_MAGBIO Magnolia biondii
MD03G1074000 Malus domestica
MD11G1080300 Malus domestica
Medtr3g462950 Medicago truncatula
Medtr3g462970 Medicago truncatula
MELO3C020563.2 Cucumis melo
Migut.G00281 Erythranthe guttata
MSTRG.24765 Avicennia marina
Nitab4.5_0000102g0140 Nicotiana tabacum
Nitab4.5_0001970g0070 Nicotiana tabacum
Nn2g11392 Nelumbo nucifera
Nn2g11393 Nelumbo nucifera
Nn2g11394 Nelumbo nucifera
Nn2g13623 Nelumbo nucifera
Oeu009379.1 Olea europaea
Oeu049272.2 Olea europaea
Os03g0679700 Oryza sativa ssp. japonica
Peaxi162Scf00216g00033 Petunia axillaris
Peaxi162Scf00451g00511 Petunia axillaris
PGR102G1950 Punica granatum
PGSC0003DMG400004151 Solanum tuberosum
Phvul.006G065300 Phaseolus vulgaris
Potri.001G249200 Populus trichocarpa
Potri.009G043200 Populus trichocarpa
Pp3c16_8630 Physcomitrium patens
Pp3c25_5720 Physcomitrium patens
Prupe.6G060700 Prunus persica
Psat5g162200 Pisum sativum
QL01p026813 Quercus lobata
RcHm_v2.0_Chr5g0068641 Rosa chinensis
RcHm_v2.0_Chr5g0068681 Rosa chinensis
RcHm_v2.0_Chr5g0068691 Rosa chinensis
Rhsim13G0072000 Rhododendron simsii
Sabra09G0030600 Salix brachista
Sabra16G0151300 Salix brachista
SalBow2G2183 Salvia bowleyana
Sc06g0008420 Simmondsia chinensis
Sc12g0000880 Simmondsia chinensis
Sed0012033 Sechium edule
SEGI_15306 Sequoiadendron giganteum
SGA_v2.0_scaffold142G35644 Striga asiatica
SHI12345 Sapria himalayana
SMO165G0069 Selaginella moellendorffii
SMO165G0141 Selaginella moellendorffii
SMO272G0033 Selaginella moellendorffii
Solyc06g006080.3 Solanum lycopersicum
Sopen06g002030 Solanum pennellii
Sp4g12340 Schrenkiella parvula
TAR633G0598 Trochodendron aralioides
Thecc.09G305300 Theobroma cacao
Thhalv10016370m.g Eutrema salsugineum
TPR.G13280 Trifolium pratense
TWI79G1750 Tripterygium wilfordii
vmacro02987 Vaccinium macrocarpon
VMungo0540G2418 Vigna mungo
Zm00001eb051950 Zea mays

User provided reference genes

Program Settings