Gene: PGR102G1950

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G1950
  • Transcript Identifier PGR102G1950.07
  • Gene Type Coding gene
  • Location NC_045129.1 : 39194760-39204235 : positive

Gene Family Information

  • ID HOM05D006184
  • #Genes/#Species 128/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031385776.1
  • name LOC116199534
  • name XM_031529916.1
  • id gene-LOC116199534
  • uniprot A0A6P8D2M8

Descriptions

  • product phosphomethylpyrimidine synthase, chloroplastic, transcript variant X7
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009228
IEA
GOA Databasethiamine biosynthetic process
GO:0009228
IEA
InterProthiamine biosynthetic process
GO:0010266
ISO
PLAZA Integrative Orthologyresponse to vitamin B1 AT2G29630
GO:0016045
ISO
PLAZA Integrative Orthologydetection of bacterium AT2G29630

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080041
ISO
PLAZA Integrative OrthologyADP-ribose pyrophosphohydrolase activity AT2G29630
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT2G29630
GO:0016830
IEA
GOA Databasecarbon-carbon lyase activity
GO:0016829
IEA
GOA Databaselyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
InterProATP binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT2G29630
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G29630
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G29630

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B
IPR003593 AAA+ ATPase domain
IPR038521 ThiC/Bza, core domain
IPR041569 AAA ATPase, AAA+ lid domain
IPR025747 ThiC-associated domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR003959 ATPase, AAA-type, core
Mapman id Description
19.4.5.8.2.2 Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH7/9
7.2.1.1 Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.hydroxymethylpyrimidine phosphate synthase (ThiC)