Gene: FAN21G1896

General Information

Structural Information

Species Fragaria x ananassa
Gene Identifier FAN21G1896
Transcript Identifier FAN21G1896.1
Gene Type Coding gene
Location Fvb3-2 : 26546254-26556828 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D006184
#Genes/#Species 128/94
Phylogenetic origin

ID ORTHO05D007862
#Genes/#Species 126/94
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id maker-Fvb3-2-snap-gene-265.44.v1.0.a1
pacid 50483633

Descriptions

Short descriptions
Ortholog descriptions

Description 4.1.99.17 - Phosphomethylpyrimidine synthase

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006508	IEA	InterPro	proteolysis
GO:0010266	ISO	PLAZA Integrative Orthology	response to vitamin B1	AT2G29630
GO:0016045	ISO	PLAZA Integrative Orthology	detection of bacterium	AT2G29630
GO:0009228	IEA	InterPro	thiamine biosynthetic process

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0080041	ISO	PLAZA Integrative Orthology	ADP-ribose pyrophosphohydrolase activity	AT2G29630
GO:0019904	ISO	PLAZA Integrative Orthology	protein domain specific binding	AT2G29630
GO:0005524	IEA	InterPro	ATP binding
GO:0051536	IEA	InterPro	iron-sulfur cluster binding
GO:0008270	IEA	InterPro	zinc ion binding
GO:0004222	IEA	InterPro	metalloendopeptidase activity
GO:0004176	IEA	InterPro	ATP-dependent peptidase activity
GO:0016887	IEA	InterPro	ATP hydrolysis activity

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009536	ISO	PLAZA Integrative Orthology	plastid	AT2G29630
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT2G29630
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	AT2G29630
GO:0016020	IEA	InterPro	membrane
GO:0016021	IEA	InterPro	integral component of membrane

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003959	ATPase, AAA-type, core
IPR011546	Peptidase M41, FtsH extracellular
IPR002817	Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B
IPR041569	AAA ATPase, AAA+ lid domain
IPR037219	Peptidase M41-like
IPR003593	AAA+ ATPase domain
IPR038521	ThiC/Bza, core domain
IPR000642	Peptidase M41
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR005936	Peptidase, FtsH

Mapman id	Description
19.4.5.8.2.2	Protein homeostasis.proteolysis.metallopeptidase activities.FtsH endopeptidase activities.FtsH plastidial protease complexes.component FtsH7/9
7.2.1.1	Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.hydroxymethylpyrimidine phosphate synthase (ThiC)