Gene: AT2G29630

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT2G29630
  • Transcript Identifier AT2G29630.2
  • Gene Type Coding gene
  • Location Chr2 : 12667395-12669569 : positive

Gene Family Information

  • ID HOM05D006184
  • #Genes/#Species 128/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT2G29630.2
  • symbol THIC
  • Alias PY,PYRIMIDINE REQUIRING
  • uniprot O82392

Descriptions

  • Description thiaminC
  • Computational description thiaminC (THIC); FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, ADP-ribose pyrophosphohydrolase activity; INVOLVED IN: response to vitamin B1, detection of bacterium, thiamin biosynthetic process; LOCATED IN: chloroplast, chloroplast stroma, plastid; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817); Has 4416 Blast hits to 4411 proteins in 1719 species: Archae - 238; Bacteria - 3466; Metazoa - 3; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink).
  • Computational description thiaminC (THIC); FUNCTIONS IN: iron-sulfur cluster binding, catalytic activity, ADP-ribose pyrophosphohydrolase activity; INVOLVED IN: response to vitamin B1, detection of bacterium, thiamin biosynthetic process; LOCATED IN: chloroplast stroma, chloroplast, plastid; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiamine biosynthesis protein ThiC (InterPro:IPR002817); Has 4416 Blast hits to 4411 proteins in 1719 species: Archae - 238; Bacteria - 3466; Metazoa - 3; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 648 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009228
IEA
GOA Databasethiamine biosynthetic process
GO:0009228
IMP
Gene Ontologythiamine biosynthetic process
GO:0009228
IEA
InterProthiamine biosynthetic process
GO:0010266
IEP
Gene Ontologyresponse to vitamin B11
GO:0016045
IMP
Gene Ontologydetection of bacterium
GO:0009229
IEA
Gene Ontologythiamine diphosphate biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0080041
IGI
Gene OntologyADP-ribose pyrophosphohydrolase activity2
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0051536
IDA
Gene Ontologyiron-sulfur cluster binding3
GO:0051536
IEA
InterProiron-sulfur cluster binding
GO:0016829
IEA
GOA Databaselyase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0019904
IPI
GOA Databaseprotein domain specific binding
GO:0016830
IEA
Gene Ontologycarbon-carbon lyase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0009507
IDA, HDA
ISM
Gene Ontologychloroplast2 4
GO:0009536
IEA
GOA Databaseplastid
GO:0009536
IDA
Gene Ontologyplastid2
GO:0009570
IEA
GOA Databasechloroplast stroma
GO:0009570
IDA, HDA
Gene Ontologychloroplast stroma3 5
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B
IPR038521 ThiC/Bza, core domain
Mapman id Description
7.2.1.1 Coenzyme metabolism.thiamine pyrophosphate biosynthesis.hydroxymethylpyrimidine diphosphate biosynthesis.hydroxymethylpyrimidine phosphate synthase (ThiC)