Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p07950 Brassica napus
A10p16060 Brassica napus
Aa31LG3G13960 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis
Actinidia33603 Actinidia chinensis
AL8G34230 Arabidopsis lyrata
Aqoxy7G02564 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea
AT5G58130 Arabidopsis thaliana
ATR0626G098 Amborella trichopoda
Atru.chr7.1014 Acer truncatum
AUR62039148 Chenopodium quinoa
BcaB08g36165 Brassica carinata
BcaC04g19905 Brassica carinata
BolC2t07471H Brassica oleracea
BolC9t57856H Brassica oleracea
BraA10t43623Z Brassica rapa
C02p13590 Brassica napus
C09p50030 Brassica napus
CANSAT01G2594 Cannabis sativa
CARHR256340 Cardamine hirsuta
CARHR271930 Cardamine hirsuta
Carub.0008s1868 Capsella rubella
Ca_02520_v3 Cicer arietinum L.
CBR_g39420 Chara braunii
Cc06_g23510 Coffea canephora
CDE05G3219 Ceratophyllum demersum
Cfa012873 Carpinus fangiana
Ciclev10007497m.g Citrus clementina
CiPaw.07G237600 Carya illinoinensis
ClCG03G011600 Citrullus lanatus
COL.COLO4_09001 Corchorus olitorius
Cpa.g.sc46.113 Carica papaya
Cre14.g633400 Chlamydomonas reinhardtii
CsaV3_1G044190 Cucumis sativus L.
CSS0003139 Camellia sinensis var. sinensis
CSS0019621 Camellia sinensis var. sinensis
DCAR_020445 Daucus carota
Dinv12632 Davidia involucrata
Duzib170G0744 Durio zibethinus
ECA234G2139 Erigeron canadensis
EL10Ac2g03821 Beta vulgaris
Eucgr.C02149 Eucalyptus grandis
FAN12G0507 Fragaria x ananassa
FAN12G3399 Fragaria x ananassa
FAN17G2087 Fragaria x ananassa
FAN22G1396 Fragaria x ananassa
FvH4_4g00130 Fragaria vesca
Glyma.09G084800 Glycine max
Glyma.15G193100 Glycine max
Gohir.A08G016500 Gossypium hirsutum
Gohir.D08G026500 Gossypium hirsutum
Gorai.004G023000 Gossypium raimondii
GSVIVG01038333001 Vitis vinifera
GSVIVG01038350001 Vitis vinifera
HanXRQChr10g0309281 Helianthus annuus
Haze_21244 Corylus avellana
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla
HPP92_017041 Vanilla planifolia
Hund03317 Selenicereus undatus
Lalb_Chr08g0233201 Lupinus albus
Lj1g0026291 Lotus japonicus
Lj6g0010551 Lotus japonicus
Lj9A583T57 Lonicera japonica
Lsat_1_v5_gn_5_81880 Lactuca sativa
Lsat_1_v5_gn_5_82020 Lactuca sativa
Manes.02G224001 Manihot esculenta
Manes.11G052190 Manihot esculenta
Mapoly0169s0023 Marchantia polymorpha
MBI16_g40727_MAGBIO Magnolia biondii
MBI16_g40728_MAGBIO Magnolia biondii
MCO13G596 Micromonas commoda
MD04G1000700 Malus domestica
Medtr2g048340 Medicago truncatula
MELO3C010014.2 Cucumis melo
Migut.L01610 Erythranthe guttata
MSTRG.26507 Avicennia marina
Nitab4.5_0000170g0140 Nicotiana tabacum
Nitab4.5_0000807g0150 Nicotiana tabacum
Nitab4.5_0002310g0140 Nicotiana tabacum
Nn5g26953 Nelumbo nucifera
Oeu000955.1 Olea europaea
Os02g0138200 Oryza sativa ssp. japonica
Peaxi162Scf00474g00018 Petunia axillaris
PGR044G0304 Punica granatum
PGR044G0474 Punica granatum
PGSC0003DMG400009839 Solanum tuberosum
PGSC0003DMG400013541 Solanum tuberosum
PGSC0003DMG400026892 Solanum tuberosum
Phvul.009G217200 Phaseolus vulgaris
Potri.018G151300 Populus trichocarpa
Pp3c1_8430 Physcomitrium patens
Prupe.1G000700 Prunus persica
Psat1g019160 Pisum sativum
PSO478G4925 Papaver somniferum
PSO782G1690 Papaver somniferum
QL11p005727 Quercus lobata
RcHm_v2.0_Chr4g0384741 Rosa chinensis
RcHm_v2.0_Chr5g0003141 Rosa chinensis
Rhsim08G0117200 Rhododendron simsii
Sabra18G0127000 Salix brachista
SalBow5G5580 Salvia bowleyana
Sc06g0001020 Simmondsia chinensis
Sed0020259 Sechium edule
SEGI_05126 Sequoiadendron giganteum
SGA_v2.0_scaffold21G09584 Striga asiatica
SMO367G1245 Selaginella moellendorffii
Solyc07g042700.4 Solanum lycopersicum
Solyc07g042740.3 Solanum lycopersicum
Sopen07g022390 Solanum pennellii
Sp6g19810 Schrenkiella parvula
TAR626G0660 Trochodendron aralioides
THA.LOC104803376 Tarenaya hassleriana
Thecc.09G202200 Theobroma cacao
Thhalv10012942m.g Eutrema salsugineum
TPR.G18712 Trifolium pratense
TPR.G20669 Trifolium pratense
TPR.G24034 Trifolium pratense
TPR.G24042 Trifolium pratense
TWI32G0914 Tripterygium wilfordii
unitig_699.g19255 Utricularia gibba
vmacro17832 Vaccinium macrocarpon
VMungo1309G0146 Vigna mungo
VMungo1309G2339 Vigna mungo
Zm00001eb209220 Zea mays

User provided reference genes

Program Settings